PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41524.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ZF-HD
Protein Properties Length: 233aa    MW: 25338.1 Da    PI: 7.1695
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41524.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer105.24e-3344100259
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                  +++rY+eClkNhA+s+GghavDGCgEfm++ g+egt ++lkCaAC+CHRnFHR+e++ 
   GAY41524.1  44 KSIRYRECLKNHAVSIGGHAVDGCGEFMAA-GDEGTLESLKCAACNCHRNFHRKETDG 100
                  5789*************************9.999*********************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MEFEEHEEQE VEEMGAAEYE SMTNASKATG PTAGGEGASA AARKSIRYRE CLKNHAVSIG  60
GHAVDGCGEF MAAGDEGTLE SLKCAACNCH RNFHRKETDG ASPLAYHHQQ QQFSPYYRGP  120
PPPAPAGYLH LTAAQPRPLA LPSSSAGGYS REEEDVSNPS SSGGGSGGTK KRHRTKFTAE  180
QKEKMLGFAE QLGWRIQKHD EASVEQFCAE TGVKRHVLKV WMHNNKHTLG KKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.13e-70ZF-HD family protein