PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY41404.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 556aa MW: 64646 Da PI: 8.7396

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY41404.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.3	4.8e-27	28	114	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYAk++GF + k +s++s+ ++e+++++f C ++g++++++++ ++r++ ++gCka+++vk++++gkw ++++++eHnHel p GAY41404.1 28 SFYKEYAKSMGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKRRQNGKWFIYSFVKEHNHELLP 114 5**************************************999877....9**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MDSYDITSNT ILEPRDDMEF ESHEAAYSFY KEYAKSMGFG TAKLSSRRSR ASKEFIDAKF 60 SCIRYGNKQQ SDDAINPRPS PKIGCKASMH VKRRQNGKWF IYSFVKEHNH ELLPAQVHFF 120 RSHRNVDPLK NDVRIRRRKN LAAVSKLFNA YQNEQFEKRW WKLVEKFHLR EVQWIQLLYE 180 DRKHWVPTFM RGISFAALST PSRSESLNSL FDKYVRGETS LREFIEQYRV ILEDRYEEEA 240 KADFDAWHET PELKSPSPFE KQMSLVYTHE IFKKFQVEVL GAAACHLKKE NEFETTTTYE 300 VKDFEDNQNF MVEWNESKLD IYCSCRSFEY KGYLCRHAII VLQMSGVFSI PSKYILQRWT 360 NAAKSRHVIS ERLDEMQSKV RRYNDLCRRA IILGEEGSIS QESYSMALSA IQEALKQCAS 420 LNISVESNAR PITSDVLSVC ATEEENQFGN TSKDKVPYPL VVNTNGNSSR ADTGRGKGSN 480 VSNTAKKGKQ ATQQLTWNVR TQDGCHQMEL SDMRPTQLHN FVQTPLQVLP TMFHNVAPTQ 540 FHNVPTTHLL DSRLPR

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MDSYDITSNT ILEPRDDMEF ESHEAAYSFY KEYAKSMGFG TAKLSSRRSR ASKEFIDAKF  60
SCIRYGNKQQ SDDAINPRPS PKIGCKASMH VKRRQNGKWF IYSFVKEHNH ELLPAQVHFF  120
RSHRNVDPLK NDVRIRRRKN LAAVSKLFNA YQNEQFEKRW WKLVEKFHLR EVQWIQLLYE  180
DRKHWVPTFM RGISFAALST PSRSESLNSL FDKYVRGETS LREFIEQYRV ILEDRYEEEA  240
KADFDAWHET PELKSPSPFE KQMSLVYTHE IFKKFQVEVL GAAACHLKKE NEFETTTTYE  300
VKDFEDNQNF MVEWNESKLD IYCSCRSFEY KGYLCRHAII VLQMSGVFSI PSKYILQRWT  360
NAAKSRHVIS ERLDEMQSKV RRYNDLCRRA IILGEEGSIS QESYSMALSA IQEALKQCAS  420
LNISVESNAR PITSDVLSVC ATEEENQFGN TSKDKVPYPL VVNTNGNSSR ADTGRGKGSN  480
VSNTAKKGKQ ATQQLTWNVR TQDGCHQMEL SDMRPTQLHN FVQTPLQVLP TMFHNVAPTQ  540
FHNVPTTHLL DSRLPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	1e-157	FAR1 family protein