PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY41287.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 228aa MW: 26100.9 Da PI: 9.6144 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85.3 | 3.6e-27 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 +ri+nk+nrq tf+kRr g+lKKA+ELS LCdaeva+iifss+gkl+e+ GAY41287.1 9 ERIQNKINRQATFAKRRDGLLKKAYELSLLCDAEVALIIFSSHGKLFEFG 58 69**********************************************95 PP | |||||||
2 | K-box | 72.7 | 1e-24 | 81 | 174 | 7 | 100 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + ++ + e l +e+ +L++ e+L+r+qRh+lGedL++L +keLq+Le+qL+k l+ R++ ++l+++++e+lqkk ++l+eenk+L+ klee GAY41287.1 81 IDINQLEPEALFREILRLRALRESLERSQRHFLGEDLGTLGVKELQKLEKQLDKTLSLSRQRNTDLMRQHLETLQKKAHDLEEENKQLKFKLEE 174 4566667788999****************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MGRGKMVLER IQNKINRQAT FAKRRDGLLK KAYELSLLCD AEVALIIFSS HGKLFEFGSN 60 FGMAKILERY RQYCYTSQEP IDINQLEPEA LFREILRLRA LRESLERSQR HFLGEDLGTL 120 GVKELQKLEK QLDKTLSLSR QRNTDLMRQH LETLQKKAHD LEEENKQLKF KLEEAIRASG 180 ADPNIAVITN HLRVHPAQQM GYNAHDRANI GAASDFVSGA ISPAQGWL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 4e-46 | MIKC_MADS family protein |