PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY41186.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 305aa MW: 34342.9 Da PI: 8.2384 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53 | 7.7e-17 | 19 | 66 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l+++v q+G ++W++++ g+ R +k+c++rw +yl GAY41186.1 19 KGLWSPEEDQRLKNYVLQHGHPCWSSVPINAGLQRNGKSCRLRWINYL 66 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 47.5 | 4.2e-15 | 72 | 117 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + +E+e ++ ++++lG++ W+ Ia++++ gRt++++k++w+++l GAY41186.1 72 RGVFNMQEEETILTLHRLLGNK-WSQIAQHLP-GRTDNEIKNYWHSHL 117 7888999***************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence |
MGCKSSEKPI AKPKPKHRKG LWSPEEDQRL KNYVLQHGHP CWSSVPINAG LQRNGKSCRL 60 RWINYLRPGL KRGVFNMQEE ETILTLHRLL GNKWSQIAQH LPGRTDNEIK NYWHSHLKKK 120 LAKLEEMEAA NATTPSSENM ESSTSPNNNP STRSSSYESL HHMEKSSAGS TDQCATQGQK 180 SCLPKLLFAE WLSLDHANVG SFANSFEQVA SKEGFNNNNN NNNNNNNNQN SNLVQDSSDT 240 FMNGYLSNEG AFGGDFIHNG FNNSFVDEML SSRFKFEDHQ FSGIGFVDSI SGDDAKRPTY 300 DKKNI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25560.1 | 1e-56 | MYB family protein |