PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY41047.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 432aa MW: 48245.7 Da PI: 4.4273 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.3 | 1.1e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEd++l ++++ G g+W++ ++ g+ R++k+c++rw +yl GAY41047.1 14 KGRWTAEEDDILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 56.5 | 6.3e-18 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE+e+++++++ lG++ W++Ia+ m+ gRt++++k++w+++l GAY41047.1 67 RGNITAEEEEIIIKLHASLGNR-WSLIASNMP-GRTDNEIKNYWNSHL 112 7999******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 432 aa Download sequence |
MGRAPCCEKV GLKKGRWTAE EDDILTKYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRADLKRGNI TAEEEEIIIK LHASLGNRWS LIASNMPGRT DNEIKNYWNS HLSRKIHTFW 120 RPSSEKTLPV KVDAAAAGTG VASDRKAGKK IGSAIMKNKS HSKKDGNINI GTEEIVAKDG 180 NINIGTEEIV ASIEEDIPLP ATPIVASIEE DIPLPATPTL EKETLPSTAL VGCMDLDSFA 240 EDKETTDKIV RSPCRQEDNG LDSSEVREKS VLCSGEETRI NNKSMLCRTG EEKETEILEP 300 FEGIDDAKLC FNDLLDPNEV WTLMEEKDTR VTNTFEGRQI GNNVPTSEEL VSANGDSVSL 360 RSCSSVNSFF DDSNFDWDWE NVIQDYDPQR DENENVLSWL WESGDKDEPK SHEGEDETDC 420 EKQNAMVAWL LS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47460.1 | 3e-74 | MYB family protein |