PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY41046.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 474aa MW: 52818.8 Da PI: 4.4883 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.8 | 5.8e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ede+l +++k G ++W++ +++ g+ R++k+c++rw +yl GAY41046.1 14 KGKWTAKEDEILTKYIKANGIESWRSLPKKAGLLRCGKSCRLRWVNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 55.9 | 1e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ TteE+e ++++++ lG++ W+ Ia++++ gRt++++k++w+++l GAY41046.1 67 RGNITTEEEETIIKLHASLGNR-WSVIASHLP-GRTDNELKNYWNTHL 112 7999******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 474 aa Download sequence |
MGRTPCCEKV GLKKGKWTAK EDEILTKYIK ANGIESWRSL PKKAGLLRCG KSCRLRWVNY 60 LRTDLRRGNI TTEEEETIIK LHASLGNRWS VIASHLPGRT DNELKNYWNT HLSKKIHTFQ 120 GPVGGETLSL PKMVDVASAS AAIDKRKAGK TSRCATKKNK SYIINKDDVT SNVPTQRPQV 180 NGSTSTDDIG NVSAQRPEAY ASTDVGYVST RRPQVNISID NDANVSTPSH RPEENVSIEE 240 AATPLPATPA QEKEALPRTV IEGCVDLDPY AEDEEILMDP IASNPCQETG LVSSEKRESF 300 VVCSGTEETT MNISILCLCP RGEEEQKETE VLAPFDGDID AETLCFNNLT DLTEVWTLLE 360 ETENCAKNII REETEIGTRI VANNMAKSEE LESANLGATE ESVACSSVTS FFDDNNFDWD 420 WESVVQGHDR QCDEENNIFS RPWETDNMAE RKSHEIGEVL DYDMPNDMVA WLLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49330.1 | 4e-65 | MYB family protein |