PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY40750.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 350aa    MW: 38941.5 Da    PI: 7.0611
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY40750.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.72.1e-05197221123
                 EEETTTTEEESSHHHHHHHHHH..T CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirt..H 23 
                 +kC  C k F+rk++L  H++   H
  GAY40750.1 197 HKCVACYKQFKRKDHLIEHMKIsyH 221
                 79******************97666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MADCNTPTQI CVLKVELQCC EACPSKMNKK LLKIQGVQGI HIDTEEGLVI VTGLLDPAII  60
MQTIGKLGVE AELLAYEKDP KKAKKKLDHF LKGNSKDNKR NLEEIDDHDH DDRGGYEYDA  120
RYAMPNCTSC HHPNYGTRRV LPGFPRPNYV HPINQPDVGN APHHTLSDEN KVDEISESSG  180
VEMDTEAELP KRSTARHKCV ACYKQFKRKD HLIEHMKISY HSVHQPKCAV CQKLFKSFES  240
LREHLTGPLS KAHCLGIFSD RGCNLCMNIF DSPSSLIKHK EACSLSAPVP FEKTLSNAES  300
QKKISGAIDE KRTCRGPKAV AMDCEMVGGG SNGTLDLCAR VCLVDEDENI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18087PKKAKKKL