PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY40154.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Protein Properties

Length: 727aa MW: 80738.3 Da PI: 6.6504

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY40154.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	64.5	1.6e-20	582	680	2	95
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 +kvl++sdv+++gr+vlpkk ae+h +++ + ++ + +ed ++r+W++++++ ++ks++y+l+ ++ +FvkangL+egDf+v++ ++ +++++ GAY40154.1 582 QKVLKQSDVGNLGRIVLPKKEAETHlpELEARDGISIAMEDiGTSRVWNMRYSFrfwpNNKSRMYLLE-NTGDFVKANGLQEGDFIVIY--SDvKCGKY 677 79***********************999999****7778***9999988888888888.******************..55599988 PP EEE CS B3 93 vvk 95 +++ GAY40154.1 678 LIR 680 776 PP

Sequence ? help Back to Top
Protein Sequence Length: 727 aa Download sequence
MKNLQLHGED LHARSKIEAN NHTGFQAMTE EQVTGAGAER EIYMQDDLLD VDDASIFYAD 60 FPPLPDFPCM SSSSSSSSTP AAVKAITSSA SSSSASSSSS AASWAVLRSD AEEDVDKKNH 120 QDQSGDAATQ PALSSTASMD ISQATDTGIN GVGVDCMDVM ENFVFMDLLD NNDLFDPSSI 180 FNQDDSQPFE GYQQQQQQNQ TQHEHRQQER DQELMMQSNN GDNSNEDGGA SDDLAMVFLE 240 WLKSNKETVS AEDLRNVKIK KSTIECAAKR LGGGKEAMKQ LLKLILEWVQ TNHLQKRRMR 300 EALLPASNNN NNLPHQQHFQ DTFQNPNPNP NPNHIPNPNL NCNPIPPEPN PCFAQSSWIG 360 QPSFIHDPAT MVTGFPTPAV GYMGDSFANG MSNINGHGYA APPSEYHMLE TTRSWPNSQF 420 GLASNYNSFS DNNLHPAPLH PQAFTGYGNQ YPYPYLPGHG EQRLMRMGSS ATKEARKKRM 480 ARQRRLSTHP RHQHHHNNQQ NQLQGQNADQ HARFGSDNCN PAAQTNSGNW VFWPASAGGP 540 AAVSPLPPVD RQPLQPQNYQ RQPASDRRQG WKPEKNLRFL LQKVLKQSDV GNLGRIVLPK 600 KEAETHLPEL EARDGISIAM EDIGTSRVWN MRYSFRFWPN NKSRMYLLEN TGDFVKANGL 660 QEGDFIVIYS DVKCGKYLIR GVKVRQPGPK SETKRTGKSQ RNQHANPPSA AMGNGSSSSL 720 QVPQTVK

Sequence ? help Back to Top

Protein Sequence Length: 727 aa Download sequence

MKNLQLHGED LHARSKIEAN NHTGFQAMTE EQVTGAGAER EIYMQDDLLD VDDASIFYAD  60
FPPLPDFPCM SSSSSSSSTP AAVKAITSSA SSSSASSSSS AASWAVLRSD AEEDVDKKNH  120
QDQSGDAATQ PALSSTASMD ISQATDTGIN GVGVDCMDVM ENFVFMDLLD NNDLFDPSSI  180
FNQDDSQPFE GYQQQQQQNQ TQHEHRQQER DQELMMQSNN GDNSNEDGGA SDDLAMVFLE  240
WLKSNKETVS AEDLRNVKIK KSTIECAAKR LGGGKEAMKQ LLKLILEWVQ TNHLQKRRMR  300
EALLPASNNN NNLPHQQHFQ DTFQNPNPNP NPNHIPNPNL NCNPIPPEPN PCFAQSSWIG  360
QPSFIHDPAT MVTGFPTPAV GYMGDSFANG MSNINGHGYA APPSEYHMLE TTRSWPNSQF  420
GLASNYNSFS DNNLHPAPLH PQAFTGYGNQ YPYPYLPGHG EQRLMRMGSS ATKEARKKRM  480
ARQRRLSTHP RHQHHHNNQQ NQLQGQNADQ HARFGSDNCN PAAQTNSGNW VFWPASAGGP  540
AAVSPLPPVD RQPLQPQNYQ RQPASDRRQG WKPEKNLRFL LQKVLKQSDV GNLGRIVLPK  600
KEAETHLPEL EARDGISIAM EDIGTSRVWN MRYSFRFWPN NKSRMYLLEN TGDFVKANGL  660
QEGDFIVIYS DVKCGKYLIR GVKVRQPGPK SETKRTGKSQ RNQHANPPSA AMGNGSSSSL  720
QVPQTVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-153	B3 family protein