PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY40030.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WOX

Protein Properties

Length: 268aa MW: 29062.4 Da PI: 5.3459

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY40030.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	48.7	1.3e-15	26	86	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l ++ +++V++WFqNrR + ++ GAY40030.1 26 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLekfgSVGDANVFYWFQNRRSRSRR 86 89***************99***********************************997 PP
2	Wus_type_Homeobox	107.3	9.2e-35	25	88	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G ++d+NVfyWFQNr++R+r++q GAY40030.1 25 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQ 88 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MEDQSQDANN NSPSRGSAER STEPVRSRWT PKPEQILILE SIFNSGMVNP PKDETVRIRK 60 LLEKFGSVGD ANVFYWFQNR RSRSRRRQRQ LQASLAGEQR NNNIQQAQAS SAAGAIQYEI 120 NSNCAAAALP MGFAATSPAT FGSTPCTNFV AGSSSFCGVM GGDDGVETLY SVSGQMGFQE 180 VVDQNSSVTS MLCPSESSNL QYQTGFITVF INGAPTEIPR GPIDVKALFG QDVVLVHSSG 240 VPIPTNEFGF LMQSLQHGES YFLVSRPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03660.1	5e-80	WOX family protein