PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY40026.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Dof

Protein Properties

Length: 492aa MW: 53159.5 Da PI: 6.2611

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY40026.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125	2.4e-39	98	157	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+++cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+ GAY40026.1 98 PDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHF 157 68999*****************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MNGGDMSAPI KDPAIKLFGA KIPVPDTRIP DVCKQITKEE AEDNHEYNSE EPDKSSGLNN 60 VKEGARNFVQ ANGIQANAKT KADQSESNTD QEKAFKRPDK IIPCPRCNSM DTKFCYFNNY 120 NVNQPRHFCK NCQRYWTAGG TMRNVPVGAG RRKNKHFASQ YRQILVSSDG VPVTGLETPN 180 SANQQLMLCG DSATTFRPST GNGTVLKFGP ETPLCESMEN VLNLRDQKRS VEIGTVTCVE 240 NKEEPSSSGS PVTASSIRGN ELPESVMQKE QVMMTGSCNE LNMQQSMHCY PVSPWGVPWN 300 PNNVASMEAV QNPSDRVCVP NGSNPGPVQW CPTTVLAVPG FCAPNIPLQF VPASYWGMGV 360 WAAGAGNIPL TGSNGCLSPS SSTSNNSCCS GNGSPTLGKH SRDPNLTDEG QSEKCVLVPK 420 TLRIDDPDEA SRSPIWATLG FKPDQKDLKS GGAIFKDFET KKGGKADVLD GAEILEANPA 480 ALSRSHTFQE ST

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MNGGDMSAPI KDPAIKLFGA KIPVPDTRIP DVCKQITKEE AEDNHEYNSE EPDKSSGLNN  60
VKEGARNFVQ ANGIQANAKT KADQSESNTD QEKAFKRPDK IIPCPRCNSM DTKFCYFNNY  120
NVNQPRHFCK NCQRYWTAGG TMRNVPVGAG RRKNKHFASQ YRQILVSSDG VPVTGLETPN  180
SANQQLMLCG DSATTFRPST GNGTVLKFGP ETPLCESMEN VLNLRDQKRS VEIGTVTCVE  240
NKEEPSSSGS PVTASSIRGN ELPESVMQKE QVMMTGSCNE LNMQQSMHCY PVSPWGVPWN  300
PNNVASMEAV QNPSDRVCVP NGSNPGPVQW CPTTVLAVPG FCAPNIPLQF VPASYWGMGV  360
WAAGAGNIPL TGSNGCLSPS SSTSNNSCCS GNGSPTLGKH SRDPNLTDEG QSEKCVLVPK  420
TLRIDDPDEA SRSPIWATLG FKPDQKDLKS GGAIFKDFET KKGGKADVLD GAEILEANPA  480
ALSRSHTFQE ST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-47	Dof family protein