PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | GAY39685.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
||||||||
Family | ZF-HD | ||||||||
Protein Properties | Length: 209aa MW: 23899 Da PI: 8.9417 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 93 | 2.6e-29 | 22 | 72 | 4 | 59 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 ++YkeC+kNhAas+Ggha DGC+Efmp ++l+CaACgCHRnFHRrev GAY39685.1 22 INYKECMKNHAASIGGHANDGCCEFMPR-----ADDSLTCAACGCHRNFHRREVRG 72 68*************************9.....3479***************9875 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 209 aa Download sequence |
MDLSLVPYKH QRPHPQQEPN IINYKECMKN HAASIGGHAN DGCCEFMPRA DDSLTCAACG 60 CHRNFHRREV RGQLLPQPKR LLLFKDPTKL VGAVDRYDEY DRRSETPERE EVNLNVCPPG 120 NVGPATGKSK RQRTKFTQEQ KDKMLEFAER IGWRMQRQDD VALNQFCNEV GVKRHVLKVW 180 MHNNKNASHR RKDESASQSP TEAAPPAAA |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 128 | 133 | KSKRQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G24660.1 | 6e-52 | ZF-HD family protein |