PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY39572.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family FAR1
Protein Properties Length: 154aa    MW: 17507.1 Da    PI: 9.9244
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY39572.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR153.11e-1650135190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 kfY++Y+++ GF v k +skk   +g+++ +tf C  +gk+++++++     + + + ++gC+ak+    +++gkw + +l+l+HnH l+
  GAY39572.1  50 KFYKAYSRQEGFPVNKLTSKKG-SDGTVKYATFACGGSGKADSRSSN---ILKLKLVVKIGCEAKIGGCVKEEGKWILRTLNLQHNHGLS 135
                 6****************99987.8888****************9988...99999************99999***************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MCCRSRRKEE ASRSDRMENF KTEHVVEDVP LEKFEPTFGM LFDSYEEMFK FYKAYSRQEG  60
FPVNKLTSKK GSDGTVKYAT FACGGSGKAD SRSSNILKLK LVVKIGCEAK IGGCVKEEGK  120
WILRTLNLQH NHGLSSDKAR YFPCNRRISA SVKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.11e-11FAR1 family protein