PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY39432.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Protein Properties

Length: 428aa MW: 48505.5 Da PI: 8.1537

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY39432.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	50.3	4.2e-16	320	400	13	96
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 s l +p kfa +h + ++++++l++++g+ W+v+ + k+++ +++ +GW Fv+ n++k gD+++F+l++ + e++v++ GAY39432.1 320 SYTLKIPYKFAMAHL--PDCKTEIVLRNLKGECWTVNSLPDSKGRMvHTFCGGWMAFVRGNDIKIGDVCIFELIS--KLEMRVHI 400 55699****9996..348899***********7766666679999*******************986..66667766 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MDNQPGMLYF RRPCFFNIFS SNLSAECLDD NLFFDKGWPV FLRDNFIGIV DDLFGFQILM 60 GELHFTCAIF DQSGCEKELH LIRSPPVRDK REREEAVAHS RQSSSKFVER KFRECSSSFE 120 SDCIDDNRDR EADSCEETRS VSVYLRSSHR LLNENLQHKP GDICIFELVH KCELHVYILR 180 VGKQYPDSQR GTTVLTGSNV SSTTISCKQF DGVPKKVKKN SLKKIQLCNV KGSKSCEIKK 240 HIGTDRNSVS IATCCLPKIS HEKSEAAAQN RNNVEAKMDS PPGGNLRTMM ALDEEKAARS 300 FNSCVPHFVR IMRKFNISGS YTLKIPYKFA MAHLPDCKTE IVLRNLKGEC WTVNSLPDSK 360 GRMVHTFCGG WMAFVRGNDI KIGDVCIFEL ISKLEMRVHI TGVGRKEVDL ESGKLTSNES 420 STVDHPPF

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MDNQPGMLYF RRPCFFNIFS SNLSAECLDD NLFFDKGWPV FLRDNFIGIV DDLFGFQILM  60
GELHFTCAIF DQSGCEKELH LIRSPPVRDK REREEAVAHS RQSSSKFVER KFRECSSSFE  120
SDCIDDNRDR EADSCEETRS VSVYLRSSHR LLNENLQHKP GDICIFELVH KCELHVYILR  180
VGKQYPDSQR GTTVLTGSNV SSTTISCKQF DGVPKKVKKN SLKKIQLCNV KGSKSCEIKK  240
HIGTDRNSVS IATCCLPKIS HEKSEAAAQN RNNVEAKMDS PPGGNLRTMM ALDEEKAARS  300
FNSCVPHFVR IMRKFNISGS YTLKIPYKFA MAHLPDCKTE IVLRNLKGEC WTVNSLPDSK  360
GRMVHTFCGG WMAFVRGNDI KIGDVCIFEL ISKLEMRVHI TGVGRKEVDL ESGKLTSNES  420
STVDHPPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	3e-12	B3 family protein