PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY39430.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 562aa    MW: 63712.3 Da    PI: 9.0994
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY39430.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.31.9e-151262081098
                 HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 ++  ++l +p k a++    ++ ++t++l+ +sg +W v +  + ++ + +++ GW eFvk++ L e+D++ Fk++g s f   v +f+
  GAY39430.1 126 TGFDHQLAIPEKVARNLR--TKLPVTVSLKAPSGFTWVVGI--TTRDHTLYFSHGWPEFVKDHFLGENDILFFKYNGGSHF--DVLMFD 208
                 566789********7766..4499*****************..999999**************************998888..666665 PP
2B340.83.9e-13448537194
                 EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 f  v+ p +v k+  + +p + ++++    +++  +++   ++ ++W  +++++k +++  l++GWk+F+ +n+L+e D++vF  d+  +++++v
  GAY39430.1 448 FTVVMRPTHVYKRFYMAIPASWMSKYlT-LENQ--DVI-LRLNEKTWITRFQFCKPRCSGGLSGGWKNFAVDNHLDEFDVCVFGPDN-PGTKPMV 537
                 778999********************53.3344..455.45688*********99999999***********************764.5555554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 562 aa     Download sequence    
MTRRTSKRLC FCLWWFGASN IGEGQLLQSA TATCMPVIRR SKVVEQCKRI QGSARSIFTS  60
VAAQLHRSVC SQESDADTVT RLKGSDRIQS FRLRDMGEAC NECRSWEEEI YWNHFQCIHF  120
IQYLHTGFDH QLAIPEKVAR NLRTKLPVTV SLKAPSGFTW VVGITTRDHT LYFSHGWPEF  180
VKDHFLGEND ILFFKYNGGS HFDVLMFDGQ SQCEKAVSYF VKKCGHTEHS NRRETRRKIR  240
ETSVEGIPNS SHCDVDITPP EKGSDDDINK IPVGQPIVTP ASSKRIRRDD TSNEFVRSRR  300
NSYFVKKRKH KDHGSVSQTK RRIGESCVEG IPNSSDCDVD VTLPEKASND EINKIPVGEP  360
IVTLDSSKRI WRVDSSNELA HTRRSSRSKT VSTNFAEMLK TKTGDEQTII NGNVALSPPF  420
TSNRRPVTQD EKNNALLMAQ AVSTTDSFTV VMRPTHVYKR FYMAIPASWM SKYLTLENQD  480
VILRLNEKTW ITRFQFCKPR CSGGLSGGWK NFAVDNHLDE FDVCVFGPDN PGTKPMVLNV  540
SIFRVVNAVV PLTQVAPASL QL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.16e-47B3 family protein