PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY38767.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 247aa MW: 26985 Da PI: 6.8306 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 101.8 | 4.7e-32 | 48 | 103 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 k+rY+eClkNhA+ +Ggha+DGCgEfm++ g+egt ++lkCaAC+CHRnFHR+ev++ GAY38767.1 48 KARYRECLKNHAVGIGGHALDGCGEFMAA-GDEGTLDGLKCAACNCHRNFHRKEVDS 103 789*************************9.999*********************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MEFEDHEEQE EEMGLPAGYD SSLGNSSQVR MGSSGGQATA EAAHPGRKAR YRECLKNHAV 60 GIGGHALDGC GEFMAAGDEG TLDGLKCAAC NCHRNFHRKE VDSSVVTPMA AGVPAAGGGE 120 VFFHPSQVPQ FTPYYRTPAG YLHVAAHHRP LALPSTSGGG HSREDQEDAS NLGGSGGSRK 180 RFRTKFTPEQ KDRMLELAEK LGWRIQKHDE EVVQQFCNDT GVKRHVLKVW MHNNKHTLVL 240 RADTDHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 1e-67 | ZF-HD family protein |