PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY38602.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | Dof | ||||||||
Protein Properties | Length: 250aa MW: 27087.8 Da PI: 8.5855 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 124.3 | 3.9e-39 | 17 | 76 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++lkcprC+stntkfCyynny+lsqPr+fCk+CrryWt+GGalrn+P+Ggg+rk+++++ GAY38602.1 17 SEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKK 76 6899***************************************************98765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MQDPATFNPM KPHFPESEQL KCPRCESTNT KFCYYNNYNL SQPRHFCKNC RRYWTRGGAL 60 RNIPIGGGTR KSNTKKRQKP DPDPSRSNPT RKSQETANSQ SMLQAAATTS TSSQEPAVTL 120 PGAVARESGT EHDPRRLYGL PLDQDHKMLD ITGSFSSLLA SNGGLGSVLD GITPNGSGFK 180 MVQMGGFGEN FGSDQSLDLI SVRGSGSQNQ GNNNGGESFM QSGNNDSSCW SGGSNGWPDL 240 AIYTPSSNFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51700.1 | 2e-41 | Dof family protein |