PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY38502.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 278aa    MW: 30713 Da    PI: 10.4064
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY38502.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.24.5e-14556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++WT+eE+e l+ +v+++G+g Wk I r  +     + R+  ++k++w+++
       GAY38502.1  5 KQKWTAEEEEALLAGVAKHGPGKWKNILRDPQfapslTQRSNIDLKDKWRNL 56
                     79***********************************99***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MGNQKQKWTA EEEEALLAGV AKHGPGKWKN ILRDPQFAPS LTQRSNIDLK DKWRNLSVSN  60
AQQGSKDKIR GPKLKTTVVA PLSNTPNSAP AASLTRNVSS GAVMNDTSTS ALDGKNGPKY  120
NAMIFEAIST LKDANGSDIS AIANFIEERQ EAPPNFRRLL SSRLRRLVSQ GKLEKVRNCY  180
KIRKETSIGV KTPTPKQKDA RLRPPRNSAL MTSREIVEEA SITAAYRIAE AENKSFLAAE  240
AFKEAERVSK MAEDTDAMLQ LVKEIYERCS RGEIVLLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.16e-87MYB_related family protein