PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY38482.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NF-YA
Protein Properties Length: 336aa    MW: 36614.9 Da    PI: 8.3723
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY38482.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA1032.8e-32188244158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 dep+YVNaKQy++Il+RRq Rakle+++kl  k+rkpylheSRh hA++R+RgsgGrF
  GAY38482.1 188 DEPIYVNAKQYRAILRRRQYRAKLEAQNKL-VKGRKPYLHESRHAHAMNRARGSGGRF 244
                 79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MPNLFSKDSG ISSACSASMN GVSGPLWGSS SESVVQQSSM SGCLSLKMAV PRQQFANTKQ  60
LSFQFQDQES SSTQSTGQSC SKEACVKDDN PSRQSVVSAP PGFNGIHVKP VGGHSKLASS  120
MGPHDFVFTP PHVDYNQSVA PFQLHYAEPY FSGLLSPFLP PQAMQIHHPQ MMGMAPARVP  180
LPLELAEDEP IYVNAKQYRA ILRRRQYRAK LEAQNKLVKG RKPYLHESRH AHAMNRARGS  240
GGRFLNTKKV PESKPNLTNN ELDMSESEAH RENYKDGGST TSCSDITSAS NSEDIFQQPE  300
FGFSGYSSIG SRSMQGCSAT MNGDGNIHRF LSSVDG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.11e-67NF-YA family protein