PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY38381.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GATA
Protein Properties Length: 280aa    MW: 31537.5 Da    PI: 8.906
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY38381.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.76.7e-18213247135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C + +Tp+WR+gp g+ktLCnaCG++yr+ +l
  GAY38381.1 213 CMHCEVAETPQWREGPMGPKTLCNACGVRYRSGRL 247
                 99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MNDDNWIFSH LDEFFDDVVD TLEDLEACNI GVDDWNANFE ALEPPPFGWT DFPVVPTSNH  60
ISCHRPQVKQ KPSSTDTSSS RSSYVCNKSN DGKYLLLSQT SSPISVLESG GSCSAEKHVP  120
INPKLVFAVK RARSKRRRPA TLNPLFIYPF ISSTSSTSED YHPETASESG SEMNLTEKPV  180
RKKQKRKKNL TVLSGSRENK KLSFQQTDTP RKCMHCEVAE TPQWREGPMG PKTLCNACGV  240
RYRSGRLVPE YRPAASPTFV PSLHSNSHKR IMEMRNKGRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.25e-52GATA family protein