PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | GAY38165.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 153aa MW: 16429.4 Da PI: 9.5255 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.1 | 0.0012 | 26 | 48 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F++ L H +H GAY38165.1 26 FACKTCNKEFPSFQALGGHRASH 48 78**********99999998887 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 153 aa Download sequence |
MAAIDTANCL MLLSKVGETD QGKRVFACKT CNKEFPSFQA LGGHRASHKK PKLMTMASSG 60 EDFDQAQMPP ASPKKPKTHE CSICGLEFAI GQALGGHMRR HRAAAAMGAA ADGLVIRPLL 120 PLPVLKKSNS CKRVLCLDLN LMPTGDDLKL WVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G28710.1 | 3e-34 | C2H2 family protein |