PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY38114.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Dof

Protein Properties

Length: 328aa MW: 35209.1 Da PI: 8.8704

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY38114.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.6	3.1e-39	77	134	5	62
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 lkcprCdstntkfCy+nnyslsqPr+fCkaCrryWt+GGalrnvPvGgg+r+nkks+ GAY38114.1 77 PLKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKSK 134 689****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MVFSSVPVYL DPPNWHHQQP NHQQGAGSEN PHQLPPIPSA PHHVVGVGGA PGGAGSIRPG 60 SMADRARLAK IPHTEVPLKC PRCDSTNTKF CYFNNYSLSQ PRHFCKACRR YWTRGGALRN 120 VPVGGGCRRN KKSKSSSSSS KSPANNTEKL QQMGNSNSTS SLPPEIIGHL QQQCNTPHQI 180 PLMPSLHNLS QYNMGSIGLN FGGIGASSGV GSSHSTDHVG FQIGSNSSMS SSAILSAGGG 240 VQQFTFFEPP NTGLYSFQAE GIEAPSSLVV ASNPRVSEQA PAKMEDHHQE LNLSRPFFGI 300 SENNQYWSGN NWTDLSALNN STSTNHLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.2	3e-50	Dof family protein