PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY38071.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | GRAS | ||||||||
Protein Properties | Length: 1992aa MW: 225944 Da PI: 6.5899 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 360.2 | 3e-110 | 347 | 720 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 l++lL+ cA+avss+d + a++lL+++++++s +gd qRla+ f+++L+ar+a+s++++ + l + + + k+ ++ l+a+k++ ++P+ k++ + + GAY38071.1 347 LRTLLILCAQAVSSNDYRTANELLKQIRQHSSLTGDGSQRLAHWFANGLEARMAGSGTGTKSFLMSLAPR-KSAADMLKAYKVYLSACPFKKLAIMFTI 444 5789***************************************************999999877666665.889************************* PP GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196 ++I++ e+++++Hi+Df+i +G+QWp L+q L+ R++gpp+lRiTg++ p++g +e++eetg+rLak++++++vpfe+n ++++++e++++e+L++ GAY38071.1 445 KMIMKVSEKASTLHIVDFGIRYGFQWPMLIQFLSMRTGGPPRLRITGIELPQPGfrPAERIEETGRRLAKYCQRFNVPFEYNCIASQNWETIQIEDLKI 543 *****************************************************9*****************************9999************ PP GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295 +p+E+laVn+ ++ ++llde+v+++ +r++vLkl+++++P+++v + + ++n++ F++rf ea+ ++s+lfd++++++pre+ er + Ere+ gre++ GAY38071.1 544 DPDEVLAVNSLFRFKNLLDETVDVNCPRNSVLKLIRKIKPDIFVNSIVNGSYNAPFFVTRFREAIFHFSSLFDMFDTTIPREDPERLMFEREVYGREAM 642 *************************************************************************************************** PP GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 nv+aceg er+er et+++W++r +aGFk++pl+++ +++ l+ + + + ++++++++++gWk+r +++ S+W GAY38071.1 643 NVIACEGLERVERPETYKQWQARTIRAGFKQLPLNQELMEKLMGKLKAWYHKDFVIDQDNNWMLQGWKGRIVFASSCW 720 **************************************************888************************* PP | |||||||
2 | GRAS | 352.6 | 6.1e-108 | 982 | 1352 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 +lL++cA+a +s+d++ a +l +++++++spdgd +qRla+yf+++L+arl+++ + ++ s+ts ++++l+a+ ++ +sP+ k s++++ GAY38071.1 982 SSLLTQCAQAAASNDQRVAIELSKQIRQHSSPDGDGTQRLAHYFANGLEARLSGTRTPYFSPAFISKTS---VADVLKAYIVYISASPFRKASNFLT 1075 689***************************************************777777666666666...9************************ PP GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledlelee 193 N++I + +e++++vHiiDf+is+G+QWp+++q + Rp+gpp++RiTg++ pe+g +e++eetg+rL+k Ae+++vpfe+++ +a+++e+++le+ GAY38071.1 1076 NRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGfrPAERVEETGHRLKKAAERCNVPFEYSA-IAQKWETIKLED 1171 ******************************************************9*****************************.7*********** PP GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErell 290 L+++++E+++V ++++l +l+d+++ +s rd+vL+l+k+++P+++v+ + +ns+ F+ rf ea+ ++salfd+lea++p+e++ r +Ere++ GAY38071.1 1172 LKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVHGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYEREVF 1268 ************************************************************************************************* PP GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 gr+++nv+aceg er+ + et+++W++r +aGF+++p++++ +k ++++ + + + +e+ +++++gWk++ L+++S+W+ GAY38071.1 1269 GRHAMNVLACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMDYHKDFDADENGQWMLQGWKGKILYALSFWK 1352 *******************************************************888*************************8 PP | |||||||
3 | GRAS | 372.9 | 4.1e-114 | 1619 | 1988 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 + lL+ cA+av+s+d++ a++ L++++ ++s gd +qRla+yf+ AL+arl++ + + +++++++ ++ l+a+++ + P++++s+l a GAY38071.1 1619 RGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHISCRTSA----ADILKAYQMSLSAWPFIRMSYLFA 1711 67899*************************************************999999999999886....9********9************** PP GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledlelee 193 Nq+I + +e+++r+HiiDf+i +G+QWp+L+q L+sRp gpp+lRiTg++ p++g +e++eetg+rL++++e+++vpfe+nv +a+++e+++le+ GAY38071.1 1712 NQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGfrPAERVEETGNRLKSYCERFNVPFEYNV-IAQKWETIRLED 1807 ******************************************************9****************************9.7*********** PP GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErell 290 ++++++E+++Vn+v+++++l+d++v +s+rd+vL+l+k+++P+v+++ ++ +n++ Fl+rf eal y+sa+fd ++a++pre+ er+ Ere++ GAY38071.1 1808 FKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNGTYNAPFFLARFREALFYFSAMFDIFDATVPREDAERMLFEREIV 1904 ************************************************************************************************* PP GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 g+++ n++aceg er+er et+++W++r ++aGF+++pl+++ +k++++ ++ + + + v+ + ++++gWk+r ++++S+W+ GAY38071.1 1905 GKDALNAIACEGIERVERPETYKQWQARNQRAGFRQLPLDQELVKKVRTKVESNYHQDFVVDVDGRWMLQGWKGRVMFALSVWK 1988 *******************************************************888*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1992 aa Download sequence |
MYDIDVHFQE LRLLAVAISM DPNSNRFSDF ISGFKVDDET VVPNANQYSN TENGFKFTIP 60 SPDLNFLDIP FNPLNPDPAL SYYPPSLNQP QPSVYLNSGS GEKSNIFSNN SSDFNSDSGA 120 VSSTSSGGSD FVESLLVGDT AEFNGSFLRN PLPEDYHSKS NSQQQSSQFS VNPPDSMTTI 180 GTGLMSSVNE FLAQNMLSDR ESVLQFKKGM EEASKFLPTG NQLIIDLESY GFSTEQKEDT 240 SRVVVKVEKE ERENSPEGSR GRKNHQREDV DLDEERSNKQ SALYTEESEL SDMFDKVLLL 300 HVDSNGKPTM CTKGQGEDSL LQKGQSNGSG EKSRSRKQGK RKDTVDLRTL LILCAQAVSS 360 NDYRTANELL KQIRQHSSLT GDGSQRLAHW FANGLEARMA GSGTGTKSFL MSLAPRKSAA 420 DMLKAYKVYL SACPFKKLAI MFTIKMIMKV SEKASTLHIV DFGIRYGFQW PMLIQFLSMR 480 TGGPPRLRIT GIELPQPGFR PAERIEETGR RLAKYCQRFN VPFEYNCIAS QNWETIQIED 540 LKIDPDEVLA VNSLFRFKNL LDETVDVNCP RNSVLKLIRK IKPDIFVNSI VNGSYNAPFF 600 VTRFREAIFH FSSLFDMFDT TIPREDPERL MFEREVYGRE AMNVIACEGL ERVERPETYK 660 QWQARTIRAG FKQLPLNQEL MEKLMGKLKA WYHKDFVIDQ DNNWMLQGWK GRIVFASSCW 720 VPAPELSMNG FEFGRGSIRA CSNHESDHSA MNEFMDHPTD HHLSINSAPS LASSSDGASR 780 YNFENVNFSY AVFKYINDIL MEEDVASNTC MLQDCLALQA TEKSFYDVLG QKYPPSPNQY 840 SHCFNPNGNS PDDDIDCSSS IDNNNSCDAT NNASDEEVRH YSLKGSRGRK IHQIDDRDFL 900 DEGRNNKQLV PLLEEAERSD MFDEVMIPKG GSYDSVQCPL FEAARNRAAR NLPCDKTRIK 960 GSNSRILRMM RQDNTSEVVD LSSLLTQCAQ AAASNDQRVA IELSKQIRQH SSPDGDGTQR 1020 LAHYFANGLE ARLSGTRTPY FSPAFISKTS VADVLKAYIV YISASPFRKA SNFLTNRMIG 1080 KTTEKATKVH IIDFGISYGF QWPCFIQRQS FRPGGPPKIR ITGIELPEPG FRPAERVEET 1140 GHRLKKAAER CNVPFEYSAI AQKWETIKLE DLKIDRDEVT VVTCMYRLNY LPDDTQVKDS 1200 LRDAVLRLIK RINPDLFVHG VANGTYNSPF FVSRFKEAMF HFSALFDMLE ATVPTEDQGR 1260 LIYEREVFGR HAMNVLACEG LERIDNPETY RQWQSRNLRA GFRQLPVDQE LLRRVKKMVK 1320 MDYHKDFDAD ENGQWMLQGW KGKILYALSF WKPGINANHI PVKTQLREHA EVCMDAIFEG 1380 FPGSMDGFKF PASSCSNQNL ANAFKLKHNS TNHHPPFLET NPHPPAGDNL NSDGDSPDSS 1440 DFSNAVLKYI SEILMEEDLE GKTCMLQDCL ALQAAEKSFY DVLGQKEGVN FAPKVSLPKH 1500 GEGVLLSSAD DGRHHSSYGS RGRKNDQRED SDYLEQGRRS KLSAVSLAVS DVKLERFDEV 1560 LLSHCEPKKD ESEPYSSYRE SENGSSRKLQ QNGQSKGSTG GTTRGRKRGD KRKEVVDLRG 1620 LLTLCAQAVA SNDQRTANEQ LKQIRRHSSA FGDGTQRLAH YFADALEARL LGAHTPMHTH 1680 ISCRTSAADI LKAYQMSLSA WPFIRMSYLF ANQTIRKLAE KATRLHIIDF GICYGFQWPC 1740 LIQILSSRPT GPPMLRITGI ELPQPGFRPA ERVEETGNRL KSYCERFNVP FEYNVIAQKW 1800 ETIRLEDFKI DRDEVTVVNC VHRMKNLPDD TVVDSSPRDA VLDLIKRINP DVFIHGISNG 1860 TYNAPFFLAR FREALFYFSA MFDIFDATVP REDAERMLFE REIVGKDALN AIACEGIERV 1920 ERPETYKQWQ ARNQRAGFRQ LPLDQELVKK VRTKVESNYH QDFVVDVDGR WMLQGWKGRV 1980 MFALSVWKPY QD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07530.1 | 0.0 | GRAS family protein |