PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY37096.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 349aa    MW: 37815 Da    PI: 9.8343
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY37096.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.00033296316223
                 EETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                 +C+ Cgk F  ++ L++H++++
  GAY37096.1 296 TCSQCGKLF-KPEKLQKHMKSC 316
                 6********.**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MLRNDEETIT AEQQKQPACS RTEVKEEEIQ QLEDPKMETP RSQSHVQEQE SSPVYAYAYG  60
SACLERSTLT DDTMSMKHER EDTNYNINHI NLNKLVPTSL TQKSNIIQKK GTLPSSSSSS  120
SSKSNKKLSS SSSKSNKKLS SSSSSAQFAK SKSCSNGASN ILRNLMKCGA VDTKNGVVVN  180
VNRPPAAVVE SKPNTTRLSK SVNLPPAVLD TTGDNDGALN LICRGDQHQL GGSARFFVTT  240
TSTWNNQHHP LYGARKSFDG TTRTTASNNK NKDGFAGPKP VSSAYHYNYK PVGGPTCSQC  300
GKLFKPEKLQ KHMKSCKGMK ASSKSSSTAE PPQSSGQEPS TSSSYLLTN