PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY36863.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GRAS
Protein Properties Length: 480aa    MW: 53863.9 Da    PI: 6.2056
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY36863.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS464.27.2e-142494751374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA++v++g+ e+a+  L+++s+laspdgd++qR+aayfteALa r+++ +++l kal++++ s  + +ee+ ++klf+e++P+lk+s++++N
  GAY36863.1  49 LIHLLVACANHVAAGSVENANIGLEQISHLASPDGDTVQRIAAYFTEALADRMLKAWPGLHKALNSTKIS--SITEEIIVQKLFFELCPFLKLSYVITN 145
                 689*************************************************************999998..59************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaI+ea+ege++vHiiD++  +++QW++Llq+L++Rpegpp+lRiTg+++    +ke le+++ rL++ Ae+l++pf+fn+ ++++le+++le+L  k+
  GAY36863.1 146 QAIVEAMEGEKMVHIIDLNSFEPAQWINLLQTLSARPEGPPHLRITGIHE----QKEVLEQMALRLTEEAEKLDIPFQFNP-IVSKLENVDLESL-RKT 238
                 **************************************************....9**************************.7999*********.589 PP

        GRAS 199 gEalaVnlvlqlhrll.................................................................desvsleserdevLklvk 232
                 gEalaV++vlq+hrll                                                                 + s     +  ++L++++
  GAY36863.1 239 GEALAVSSVLQMHRLLatddemprrtspsasrtsssshlqrvlhmnrrtlgewlekdsvlmfspspdsasasasastplslAASP----KMGSFLNALW 333
                 *************************************************************************996643333333....5677****** PP

        GRAS 233 slsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplse 331
                 slsPkvvvv+eqe++hn++s++er++eal++y+a+fd+le++++r+s er+kvE++l+g+ei+n++aceg errerhe+lekW  rle aGF+ vpls+
  GAY36863.1 334 SLSPKVVVVTEQESNHNGPSLMERVMEALNFYAAMFDCLESTMSRASIERQKVEKMLFGEEIKNIIACEGIERRERHEKLEKWILRLELAGFGRVPLSY 432
                 *************************************************************************************************** PP

        GRAS 332 kaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 + + qa++ll+ ++ dgy+++ee+g+lv++W+dr+L+svSaWr
  GAY36863.1 433 HGMLQARRLLQSYGYDGYKIKEENGCLVICWQDRTLFSVSAWR 475
                 ******************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    
MAGMVQEDGA SSASSSPLQF FSMMSLSPAF GSPYPWLREL KSEERGLCLI HLLVACANHV  60
AAGSVENANI GLEQISHLAS PDGDTVQRIA AYFTEALADR MLKAWPGLHK ALNSTKISSI  120
TEEIIVQKLF FELCPFLKLS YVITNQAIVE AMEGEKMVHI IDLNSFEPAQ WINLLQTLSA  180
RPEGPPHLRI TGIHEQKEVL EQMALRLTEE AEKLDIPFQF NPIVSKLENV DLESLRKTGE  240
ALAVSSVLQM HRLLATDDEM PRRTSPSASR TSSSSHLQRV LHMNRRTLGE WLEKDSVLMF  300
SPSPDSASAS ASASTPLSLA ASPKMGSFLN ALWSLSPKVV VVTEQESNHN GPSLMERVME  360
ALNFYAAMFD CLESTMSRAS IERQKVEKML FGEEIKNIIA CEGIERRERH EKLEKWILRL  420
ELAGFGRVPL SYHGMLQARR LLQSYGYDGY KIKEENGCLV ICWQDRTLFS VSAWRFRRYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein