PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY36742.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WRKY

Protein Properties

Length: 382aa MW: 42232.3 Da PI: 8.4401

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY36742.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	107.4	7.3e-34	91	147	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dD ynWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers d++v+ei+Y+g+Hnh+ GAY36742.1 91 DDPYNWRKYGQKHVKGSEFPRSYYKCTHPNCPVKKKVERSL-DGQVTEIIYKGQHNHP 147 8**************************************.*************8 PP
2	WRKY	107.1	8.5e-34	261	319	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+ver+++dpk+v++tYeg+Hnh+ GAY36742.1 261 LDDGYRWRKYGQKVVKGNPYPRSYYKCTTTGCNVRKHVERASTDPKAVITTYEGKHNHD 319 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MTHQQALAQV TAQAAQAQSH TQIPAEYPSS LSSAPTTSMT QVSSLTANTT TNQQMTPLMP 60 DSSVQMKESS DFSHSDQRPQ SSSYVSDKPA DDPYNWRKYG QKHVKGSEFP RSYYKCTHPN 120 CPVKKKVERS LDGQVTEIIY KGQHNHPPPQ SNKRAKDAGS LNGNLNNQGS SELAPQLKEG 180 AGYSMSKKDQ ESSQVTPENI SGTSDSEEVG DAETAVFEKD EDEPDAKRRS TEIRVSEPTA 240 SHRTVTEPRI IVQTTSEVDL LDDGYRWRKY GQKVVKGNPY PRSYYKCTTT GCNVRKHVER 300 ASTDPKAVIT TYEGKHNHDV PAGKNSSHNT ANSNASQIKP HNTGTNLGNN NQQPIARLRL 360 KEEHLTSWGN LCKSINGSIT RE

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MTHQQALAQV TAQAAQAQSH TQIPAEYPSS LSSAPTTSMT QVSSLTANTT TNQQMTPLMP  60
DSSVQMKESS DFSHSDQRPQ SSSYVSDKPA DDPYNWRKYG QKHVKGSEFP RSYYKCTHPN  120
CPVKKKVERS LDGQVTEIIY KGQHNHPPPQ SNKRAKDAGS LNGNLNNQGS SELAPQLKEG  180
AGYSMSKKDQ ESSQVTPENI SGTSDSEEVG DAETAVFEKD EDEPDAKRRS TEIRVSEPTA  240
SHRTVTEPRI IVQTTSEVDL LDDGYRWRKY GQKVVKGNPY PRSYYKCTTT GCNVRKHVER  300
ASTDPKAVIT TYEGKHNHDV PAGKNSSHNT ANSNASQIKP HNTGTNLGNN NQQPIARLRL  360
KEEHLTSWGN LCKSINGSIT RE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-126	WRKY family protein