PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY36729.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 309aa    MW: 34450.2 Da    PI: 4.9263
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY36729.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.8e-192372255
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ GVr+++ +grWvAeI+d      ++ r++lg+++taeeAa+a+++a+  l+g
  GAY36729.1 23 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTYDTAEEAARAYDEAACLLRG 72
                789******.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MSWGQVMEEA ALSLCGGRRG RKRFVGVRQR PSGRWVAEIK DTIQKIRVWL GTYDTAEEAA  60
RAYDEAACLL RGANTRTNFW PCSLSSSTRP PALPSRITNL LLHRLKARNS RNDQSTATSI  120
DMTHDQEAAN NLLEDTGQSA DNYFNVTQER TNCKKEKIDF RFVDALGAAS ACTYEYSPFE  180
IAQEMMGSME KEDGSSSSED EGDPTMQLIR ETMKRMKYER NFSASLYAFN GISECLKMKL  240
GCSDNNDPLS TFTISNNYEE DQDQKEKEND VVVGTSLVST SIQTAAGSSS STASSFSSTK  300
EESLIRDVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-13ERF family protein