PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY36678.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Dof

Protein Properties

Length: 494aa MW: 54752.5 Da PI: 7.9665

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY36678.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.9	6.1e-40	144	204	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+ss GAY36678.1 144 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSS 204 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MSEVKDSAIK LFGQMIPLSL LKFQQQQGPE TLANDHSASD DDHHQEACCD RNPETALREE 60 SSNKQQQQQQ QQQQRDDKEH SGQQIIEDEH EDVTSKQKDP ITSSGNSDNP KTLSVDRETR 120 SLKSSKNGEQ SETSNSQEKT LKKPDKILPC PRCNSMDTKF CYYNNYNVNQ PRHFCKNCQR 180 YWTAGGTMRN VPVGAGRRKN KSSSASNYRQ IMISEALRTF QANASGGVHK PYSGNNGTLL 240 TFGSDSPLHE SVASVPNLSD KSQNCLRNGF HRSEQKILVS GTDNGSSITA SSSLEKGGNC 300 TSQDIRTKNY RGSVPQVPYF PGPPWPHHWN TPMPPPGFYP SGFPVSFYPE TTYWGCAVPG 360 YCNMPCVPPN ASLQSQFVPK TLSTPTLGKH SRDGDIITPA STEKEEPSTG SRNSERCVLV 420 PKTLRIDDPS EAAKSSIWAT LGIKNEKTTS AGECLFKGFQ SKSDHRNYIA ETSEVLQANP 480 AALSRSLNFH ERHN

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MSEVKDSAIK LFGQMIPLSL LKFQQQQGPE TLANDHSASD DDHHQEACCD RNPETALREE  60
SSNKQQQQQQ QQQQRDDKEH SGQQIIEDEH EDVTSKQKDP ITSSGNSDNP KTLSVDRETR  120
SLKSSKNGEQ SETSNSQEKT LKKPDKILPC PRCNSMDTKF CYYNNYNVNQ PRHFCKNCQR  180
YWTAGGTMRN VPVGAGRRKN KSSSASNYRQ IMISEALRTF QANASGGVHK PYSGNNGTLL  240
TFGSDSPLHE SVASVPNLSD KSQNCLRNGF HRSEQKILVS GTDNGSSITA SSSLEKGGNC  300
TSQDIRTKNY RGSVPQVPYF PGPPWPHHWN TPMPPPGFYP SGFPVSFYPE TTYWGCAVPG  360
YCNMPCVPPN ASLQSQFVPK TLSTPTLGKH SRDGDIITPA STEKEEPSTG SRNSERCVLV  420
PKTLRIDDPS EAAKSSIWAT LGIKNEKTTS AGECLFKGFQ SKSDHRNYIA ETSEVLQANP  480
AALSRSLNFH ERHN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	6e-94	Dof family protein