PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY36470.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 263aa    MW: 29236.1 Da    PI: 6.8456
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY36470.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.10.0002993115123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C k F ++  L  H++ H
  GAY36470.1  93 FECQYCFKEFANSQALGGHQNAH 115
                 89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MEKEMTTVFS HTSDGENASS AGSCVEKKLR LFGFELNPCN NNNTNDETCR LKGSAEGDES  60
VNSSNTASSG SEKPSSSRDK SSPPTGESDY KKFECQYCFK EFANSQALGG HQNAHKKERM  120
KKKRLQLQAR KASLNSYLQP YQNMYNLSFN NTYHGSNTAS TWFYDPSCYP CDNQFTLYEE  180
SQISFNPYDQ DPHVSKWCST ATIPTQTPFH QQDSTPSMFT RTDRSGDHTP ALIIKPSPLS  240
AAASKQSCKS LDLQLGLSLE SGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10480.12e-16C2H2 family protein