PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY36305.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 329aa MW: 37265.7 Da PI: 4.8401

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY36305.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.4e-09	272	306	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp+++++ +LA+++gL+++q+ +WF N+R ++ GAY36305.1 272 KWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 306 569*****************************885 PP
2	ELK	28.7	3.1e-10	227	247	2	22
ELK 2 LKhqLlrKYsgyLgsLkqEFs 22 LK+ LlrK+++++gsLk EFs GAY36305.1 227 LKDKLLRKFGSHIGSLKLEFS 247 9*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MDEMCGFNST GDKGSCWENL VFPTSHEYDY SSSPLVYPGR IPTFGSDELL SAAASAISEA 60 AAPISSTPPP HPHPQEIQPP EVEDVSTVIK AKIASHPCYP RLLEAYIDCQ KVGAPPEIAY 120 LFDEIRREKD LYRRDTVPTC FGADPELDEF METYCDMLAK YKSDLARPFD EATTFLNKVE 180 LQLRNLCTTT ASVRSLSEDG AASSDEEYSG AETEAQDAEA RDEDRHLKDK LLRKFGSHIG 240 SLKLEFSKKK KKGKLPKESR QTLLDWWNAH YKWPYPTEAD KLQLAESTGL DQKQINNWFI 300 NQRKRHWKPS ENMHFAVMDN LSGPLFTDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-125	TALE family protein