PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY36143.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family FAR1
Protein Properties Length: 653aa    MW: 74700.9 Da    PI: 8.5462
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY36143.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.92.6e-21104179190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +fY++YA++vGF++r+ + ++s+++g++ +r+fvCskeg++ +              +rtgC a ++v+k+++gkw++++++++HnHe+ 
  GAY36143.1 104 EFYSQYAERVGFKIRIGQLYRSRTDGSVSSRRFVCSKEGFQLN--------------SRTGCSAYIRVQKRDSGKWVLDQMKKDHNHEFD 179
                 6***************************************876..............589***************************985 PP
2FAR1674.8e-21255330190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +fY++YA+++GF+vr+ +  +sk++g++t+r+fvCskeg++++              +r+gC a +++k+++ g w v++l+++HnH+l 
  GAY36143.1 255 QFYQAYAEKTGFRVRIGQLFRSKNDGSVTSRRFVCSKEGFQHP--------------SRVGCGAFMRIKRKEFGSWIVDRLQKDHNHDLE 330
                 6***************************************999..............4899***************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 653 aa     Download sequence    
VSPREWRVSG RAPHKTGGED LRDEESGLSR PLNDQNDSGS GHFTEMRSSN TDLNTEVCEN  60
AMVLNAYPIG VLSVIDNVNG ADEGWSRMEP SVGLEFDTAD DAREFYSQYA ERVGFKIRIG  120
QLYRSRTDGS VSSRRFVCSK EGFQLNSRTG CSAYIRVQKR DSGKWVLDQM KKDHNHEFDS  180
AGENSLPTAK QRNHSAKKSS VNVSHRPKIK SFADGGSCPS GVINFKRLRS SAGEGECIPE  240
PYAGLEFNSA NEAYQFYQAY AEKTGFRVRI GQLFRSKNDG SVTSRRFVCS KEGFQHPSRV  300
GCGAFMRIKR KEFGSWIVDR LQKDHNHDLE SQMGANKKTF ATSKKFIEDV SGGLDSVDLA  360
EINNGSIIKI SQENNIGSAW YRSQSIAQFS TMWTALIEKY GQRDNIWLKE MYEKRESWVP  420
LYLRRSFFAG IPIGKSIESF FGATLTAQTP LREFLSRYTQ GLERRREEER KEDFNTWNLQ  480
AFLQTKEPIE EQCRRLYTRN MFKIFQNELL QSFDYLVTKT NEEATIVRYL VRKCGNEDEK  540
HVVTFSALNV SCSCQMFEFE GMLCGHILKV FNLMNVKEIP SQYILHRWTR NAEYGVLRDT  600
ESGFSAQELK ALMVWSLRET ASKYVESGTG SLEKHKLAYE IMREGGNKLC WQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.11e-167FAR1 family protein