PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY35835.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 200aa    MW: 21257.7 Da    PI: 9.3645
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY35835.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.80.0001798120123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 +kC+ C+k Fs+   L  H  +H
  GAY35835.1  98 FKCSVCDKAFSSYQALGGHKASH 120
                 89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MALEALNSPT TSTPPFHFEE PNLHCLEPWT KRKRSKRPHN PPTEEEYLAL CLVMLARGTT  60
STAVLTNCNT TTAASQRQKS PAPSTAATTS SSDQKLLFKC SVCDKAFSSY QALGGHKASH  120
RKGSGGGDEH SASTTPTPTQ PPRPPAYRTP LVGTHECSIC HKSFPTGKAL GGHKRCHYDG  180
GEKSGVTSSG SSSTHSKSPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.13e-39C2H2 family protein