PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY35760.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 337aa MW: 37617 Da PI: 5.2265

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY35760.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51	3.3e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEde+l ++++ G g+W++ ++ g+ R++k+c++rw +yl GAY35760.1 14 KGRWTAEEDEILTKYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	53.9	4.1e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE+e +v+++ lG++ W++Ia+ ++ gRt++++k++w+++l GAY35760.1 67 RGNITAEEEETIVKLHSSLGNR-WSLIAAQLP-GRTDNEIKNYWNSHL 112 7999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MGRAPCCEKI GLKKGRWTAE EDEILTKYIR ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRADLKRGNI TAEEEETIVK LHSSLGNRWS LIAAQLPGRT DNEIKNYWNS HLSRKTFSFT 120 GPADDPLTSD DLSNNGIKLA GGCKRRKGRT SKVNSKKHKL ALASIGMPKT KRGTISEVLD 180 QQVTADENKS SIGQVSCMAS DEFFCGEASS DQASGLCLSK DIESEVLGPY EWLDSEIKRV 240 NSNLNREKGS AEDEVKRDQD KMAKSAEKDS VFWGSNEDEL LYTFDPTMMN CSGFDEEWLD 300 FDWAAGGAEC HNQCELRDGD DKLLCWLWDS GNGEGCQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	144	171	KRRKGRTSKVNSKKHKLALASIGMPKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49330.1	1e-82	MYB family protein