PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY35719.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GRAS
Protein Properties Length: 600aa    MW: 68553.9 Da    PI: 4.7903
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY35719.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS286.11e-872295983374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl....fsevsPilkfshlt 97 
                 e Ll++Ae v +++ e+a++lL++ + l+s++g+p+qR++ yf eAL++r+ r + ++  + +++ t++ + + ++++ +      +e  P+ k+ ++t
  GAY35719.1 229 EFLLAAAEKVGDQQYERATRLLNQCEWLSSKNGNPVQRVVYYFSEALRERIDRDTGRIT-TKQTRMTRPFDFEVAIMSSNPttlaCHEQIPFSKIVQFT 326
                 679**************************************************555554.334444444443444333322355799************ PP

        GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                   qaIle  ++++r+HiiD++i +G++W  L+qaLasR       l+i +vg    ++k+ +eetg+rL +fA+++++pf++nv++++++ +l+ + ++
  GAY35719.1 327 GIQAILENGAEAKRIHIIDLGIRNGVHWTVLMQALASRYdCTIELLKISAVGT---TEKQLIEETGKRLMSFAQSMNLPFSYNVVMVSDMLELKEDLFE 422
                 **************************************9445569********...5799*************************************** PP

        GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                 ++++E++aV   l l ++ + +  le+    +++++++++P v+vv+e ea+hns+ F++rf+eal ++sa+fd+l+a + +++ +r+  E ++    i
  GAY35719.1 423 IDNEETVAVYALLFLRSMIAFPNRLEN----IMRVIRKINPSVMVVTEIEANHNSPVFVNRFIEALFFFSAFFDCLDACMEPDNPHRTITELVFYTDGI 517
                 ******************977777777....******************************************************************** PP

        GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +++va+eg+er+ r+ +l  Wr+ + + G+++++ls +   qa+l++++++ +   +++ + +sl+ gWk+ p+ svS+W+
  GAY35719.1 518 RSMVAAEGEERETRNVKLDVWRAFFARYGMEEMELSMSSLYQARLMVKQFDcGSSCTIDINGKSLIVGWKGTPIKSVSVWK 598
                 ***************************************************9999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 600 aa     Download sequence    
MAKVVFSLER ISYGEVQDKL SSTDNRYETL EGEIAAKQFN SYGAEDWGES GAIDQLYSHN  60
GFYQDVSSEQ GFIFSKYQQP QQQEHLYSNY ELLDNLKFDI ASPPIQASLE EIAKFGEIPT  120
GTQGVVEPEK EKLFPFSSSS LELLRNYGSG FKRLNRERRI EPSNDKNTTF TKVESRKLSV  180
EEIMRIAGER FIRSCSRAVE DVVSMLSNPF DLSFSGLSDE EIRNVELAEF LLAAAEKVGD  240
QQYERATRLL NQCEWLSSKN GNPVQRVVYY FSEALRERID RDTGRITTKQ TRMTRPFDFE  300
VAIMSSNPTT LACHEQIPFS KIVQFTGIQA ILENGAEAKR IHIIDLGIRN GVHWTVLMQA  360
LASRYDCTIE LLKISAVGTT EKQLIEETGK RLMSFAQSMN LPFSYNVVMV SDMLELKEDL  420
FEIDNEETVA VYALLFLRSM IAFPNRLENI MRVIRKINPS VMVVTEIEAN HNSPVFVNRF  480
IEALFFFSAF FDCLDACMEP DNPHRTITEL VFYTDGIRSM VAAEGEERET RNVKLDVWRA  540
FFARYGMEEM ELSMSSLYQA RLMVKQFDCG SSCTIDINGK SLIVGWKGTP IKSVSVWKFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.12e-45GRAS family protein