PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY35621.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 334aa MW: 37668 Da PI: 7.0746

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY35621.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3.2e-17	30	77	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +l++++ +G g+W+ ar+ g++Rt+k+c++rw++yl GAY35621.1 30 RGPWTVEEDFKLINYISNHGEGRWNCLARCAGLKRTGKSCRLRWLNYL 77 89********************************************97 PP
2	Myb_DNA-binding	49.4	1.1e-15	83	126	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++ +++++ ++G++ W++Ia++++ gRt++++k++w++ GAY35621.1 83 RGNITLEEQLMILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 126 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MEVKGRACRS KGNSKSSSTT ISEEDLDLRR GPWTVEEDFK LINYISNHGE GRWNCLARCA 60 GLKRTGKSCR LRWLNYLRPD VRRGNITLEE QLMILELHSR WGNRWSKIAQ HLPGRTDNEI 120 KNYWRTRVQK HAKQLKCDVN SKQFKDTMRY LWMPRLIERI QANKASEAPA ATATPIATTG 180 ATSGSFTTAP IDEPASRFFN NIDVGTEQMV MQPLNCSSQV TTSQITTCHY TPENSSTGAS 240 SDSFGTQVSS VSDLAEYYAI PVNNNTNPDY FQSHVGFAES SLISPTGYFN PGIDFQAAFE 300 ANNQMMDGGD ASDNLWNMNV DELWSLQQQF NTNM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	2e-87	MYB family protein