PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY35402.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 635aa MW: 73529.5 Da PI: 6.46

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY35402.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.5	1.7e-16	69	152	1	82
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkle 82 ++Y ++A++ GFsvrk++s+ s + g ++kr+fvC+++g++ +kk +++r r++ r+gC+ak+ ++ke ++w v +++ GAY35402.1 69 EYYGNFARKSGFSVRKERSRLSPQLG-VYKRDFVCYRSGFAPMRKKPGGEHHRDRKSVRCGCDAKMYLSKEVvegVSQWFVVQFS 152 59******************8888.****************9********************987667789998886 PP

Sequence ? help Back to Top
Protein Sequence Length: 635 aa Download sequence
MALLTSKNIW MRRQQCPCGD WKCYVSHEGD SEETSVASQL AKNDENSLNE SMVAPYVGMV 60 FKSDDDAFEY YGNFARKSGF SVRKERSRLS PQLGVYKRDF VCYRSGFAPM RKKPGGEHHR 120 DRKSVRCGCD AKMYLSKEVV EGVSQWFVVQ FSNLPFLERD VRNFVQNRRR AVQENDALLT 180 EKRETDTMEL LDICKATNET EEYFVYDFTV DENNKVENIA WSFPGSIHAY AMLGDVVYFD 240 TTYRSITYGL IFGAWLGIDS NGRTILFGVA LLQDETLRSF AWALQTFVHF MKGRCPKTIL 300 TDLDPGLGDA IRSALPNTRH VISVCNILPK LSGWFSLLLG SQFSEFKSEF GALCHVESTE 360 DFELQWSQMV SMFGLGSDRH IALLYSVRTS WALSYIRGYF LARMATPAYL KSVDAFLKRI 420 FAAQTCLRSF FEQVGLFSNL QNQPRQEMQY MHMKTCIPIE EQARRTLTPF AFNAFQRELV 480 LAMQYSASEL GNGTYLVHHF KKMDGERRVI WIPDDEQLHC SCKEFESSGI PCRHAFRVFI 540 TKNYFQLPEK YFPSRWLRES SLAIFYDHDA QQNEDWIQEF HSLTERLFAE SSITKERSDY 600 IRKELTKELT RLLNEVRDMP ESDGIAMDFT LSPTD

Sequence ? help Back to Top

Protein Sequence Length: 635 aa Download sequence

MALLTSKNIW MRRQQCPCGD WKCYVSHEGD SEETSVASQL AKNDENSLNE SMVAPYVGMV  60
FKSDDDAFEY YGNFARKSGF SVRKERSRLS PQLGVYKRDF VCYRSGFAPM RKKPGGEHHR  120
DRKSVRCGCD AKMYLSKEVV EGVSQWFVVQ FSNLPFLERD VRNFVQNRRR AVQENDALLT  180
EKRETDTMEL LDICKATNET EEYFVYDFTV DENNKVENIA WSFPGSIHAY AMLGDVVYFD  240
TTYRSITYGL IFGAWLGIDS NGRTILFGVA LLQDETLRSF AWALQTFVHF MKGRCPKTIL  300
TDLDPGLGDA IRSALPNTRH VISVCNILPK LSGWFSLLLG SQFSEFKSEF GALCHVESTE  360
DFELQWSQMV SMFGLGSDRH IALLYSVRTS WALSYIRGYF LARMATPAYL KSVDAFLKRI  420
FAAQTCLRSF FEQVGLFSNL QNQPRQEMQY MHMKTCIPIE EQARRTLTPF AFNAFQRELV  480
LAMQYSASEL GNGTYLVHHF KKMDGERRVI WIPDDEQLHC SCKEFESSGI PCRHAFRVFI  540
TKNYFQLPEK YFPSRWLRES SLAIFYDHDA QQNEDWIQEF HSLTERLFAE SSITKERSDY  600
IRKELTKELT RLLNEVRDMP ESDGIAMDFT LSPTD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein