PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY34600.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

HB-other

Protein Properties

Length: 1708aa MW: 192499 Da PI: 5.3374

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY34600.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	39.1	1.3e-12	11	46	22	57
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + yps+++r+eL++klgL++rq ++WF+ rR k+kk GAY34600.1 11 ETYPSESTRAELSEKLGLSDRQLQMWFCHRRLKDKK 46 78********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1708 aa Download sequence
MEVDSDAEKT ETYPSESTRA ELSEKLGLSD RQLQMWFCHR RLKDKKEKEN PPKKMRKNVA 60 VVMPESPIDE LRAGAEPGSD YGSGSGSGSS PYLMELRNAV GSSRGLMDDM PIVRRSYESQ 120 QSIMELRAIA CVEAQLGEPL REDGPILGME FDSLPPDAFG APIAGSSEQQ KQSGHPYESK 180 IYDRYDTKSN KVIPRAHHEY QSLSDQPYFH GSPIDGSRAR TSFLHANEPS SRVHGVQGHV 240 ARVRVLSQQD KPAHIFSSPN GGEDSLLQRE STSNNRKNAQ STSHPIFGTE DPYLLSDGQT 300 FNNDAEQRME KKRKCDEARI AREVEANEIR IQKELERQDN LRRKNEERIR KEMEKHERER 360 RKEEERLMRE RQREEERSLR EQKREMERRE KFLQKEYLRA EKRRLKEELR MEKQAAKRKV 420 AIEKATARKM AKESMDLIED EQLELMDLAA ASKGLSSIIH LDLETLQNLD SFRDSLSVFP 480 PKTVRLKRPF SVQPWSDSEE NVGNLLMVWR FFITFADVLG LWPFTLDEFV QAFHDHESRL 540 LGEIHLALLK SIIKDIEDVA RTPSTGLGMN QYCAANPEGG HPRIIEGAYA WGFDIRNWQQ 600 LLNPLTWHEI FRQLALSAGF GPKLKKMSSK WANVGDNHEG KGCEDIVSTI RNGSAAENAF 660 AWMREKGLLL PRRSRHKLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK 720 TPEASISVAL TRDTKLFERI APSTYCVRPA FRKDPADAEA ILAAARKKIR IFENGFLGGE 780 DADDVERDED SECDVEEDPE VEDLATPSSA NKNIDRYDEA NTCLVSGKDN ACNDVALSVQ 840 NEVDKGFSSF SLNDSKDARC QGTADNYVAV EDFGASHLNQ ENIEIDESKP GESWIQGLAE 900 GDYSHLSVEE RLNALVGLIG VANEGNSIRA VLEDRLEAAN ALKKQMWAEA QLDKSRLKEE 960 NITKLDFTPA MGSKAETHLA SSAAEGGQSP LPVFVDNKNE ASPSLAEDQK PMFGSQVFQN 1020 HLSEFPNERT VAVQDPSTGL DNLATQQHGY ASKRSRSQLK AYIAHMAEEM YVYRSLPLGQ 1080 DRRRNRYWQF ATSASRNDPC SGRIFVELHD GTWRLIDTVE AFDALLSSLD ARGTRESHLR 1140 IMLQKIETSF KDKVRRNLQG IDTVGQSRTA IKNEAAEMDV DPDFASSDSP SSTVCGLNSD 1200 TLETSSSFRI ELGRNEIEKK AALERFQDFQ WWMWRECFNS LSLCASKNEK TRCRQLLVIC 1260 DVCLDSYLCE DAHCPSCHRT FGAVDKSSKF SEHSIQCEEK TKLGLRDIHV SDSSLPLGIR 1320 LLKPLSAVIE AYIPPEALEA SWTDERRKTW GMKLNMSSSA EEVLQLLTIL ESGIKRSYLS 1380 SNFETTKELL GSSFTCADPW SVPILPWIPK TTAAVALRLL ELDASIMYVK PEKPEHFEED 1440 KEANERVLSV PVKTLNPAIK KFPGGSVKLI PSRYLPLKSK EVVLKELDQD RLVKEENYSN 1500 LAGKRKNYRR GKGNRDHGWS RKYHKKTPSI TADAGRRTAR EHEGLNLRLK QQGLRTNGRG 1560 RRTVRKRADR TSKNETFQGQ MGHMVIPDSS SGLHRNLDEE EWGVGKERMI NMEDAENSNS 1620 AEAVDSDDNV QAVEYEQGNW EVGFNGAANG WNRDVMEVSD EDEDAFGDDA GIEEAVDEYS 1680 EGNIDMSEAS DQNGIDDGVD SAASEYSD

Sequence ? help Back to Top

Protein Sequence Length: 1708 aa Download sequence

MEVDSDAEKT ETYPSESTRA ELSEKLGLSD RQLQMWFCHR RLKDKKEKEN PPKKMRKNVA  60
VVMPESPIDE LRAGAEPGSD YGSGSGSGSS PYLMELRNAV GSSRGLMDDM PIVRRSYESQ  120
QSIMELRAIA CVEAQLGEPL REDGPILGME FDSLPPDAFG APIAGSSEQQ KQSGHPYESK  180
IYDRYDTKSN KVIPRAHHEY QSLSDQPYFH GSPIDGSRAR TSFLHANEPS SRVHGVQGHV  240
ARVRVLSQQD KPAHIFSSPN GGEDSLLQRE STSNNRKNAQ STSHPIFGTE DPYLLSDGQT  300
FNNDAEQRME KKRKCDEARI AREVEANEIR IQKELERQDN LRRKNEERIR KEMEKHERER  360
RKEEERLMRE RQREEERSLR EQKREMERRE KFLQKEYLRA EKRRLKEELR MEKQAAKRKV  420
AIEKATARKM AKESMDLIED EQLELMDLAA ASKGLSSIIH LDLETLQNLD SFRDSLSVFP  480
PKTVRLKRPF SVQPWSDSEE NVGNLLMVWR FFITFADVLG LWPFTLDEFV QAFHDHESRL  540
LGEIHLALLK SIIKDIEDVA RTPSTGLGMN QYCAANPEGG HPRIIEGAYA WGFDIRNWQQ  600
LLNPLTWHEI FRQLALSAGF GPKLKKMSSK WANVGDNHEG KGCEDIVSTI RNGSAAENAF  660
AWMREKGLLL PRRSRHKLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK  720
TPEASISVAL TRDTKLFERI APSTYCVRPA FRKDPADAEA ILAAARKKIR IFENGFLGGE  780
DADDVERDED SECDVEEDPE VEDLATPSSA NKNIDRYDEA NTCLVSGKDN ACNDVALSVQ  840
NEVDKGFSSF SLNDSKDARC QGTADNYVAV EDFGASHLNQ ENIEIDESKP GESWIQGLAE  900
GDYSHLSVEE RLNALVGLIG VANEGNSIRA VLEDRLEAAN ALKKQMWAEA QLDKSRLKEE  960
NITKLDFTPA MGSKAETHLA SSAAEGGQSP LPVFVDNKNE ASPSLAEDQK PMFGSQVFQN  1020
HLSEFPNERT VAVQDPSTGL DNLATQQHGY ASKRSRSQLK AYIAHMAEEM YVYRSLPLGQ  1080
DRRRNRYWQF ATSASRNDPC SGRIFVELHD GTWRLIDTVE AFDALLSSLD ARGTRESHLR  1140
IMLQKIETSF KDKVRRNLQG IDTVGQSRTA IKNEAAEMDV DPDFASSDSP SSTVCGLNSD  1200
TLETSSSFRI ELGRNEIEKK AALERFQDFQ WWMWRECFNS LSLCASKNEK TRCRQLLVIC  1260
DVCLDSYLCE DAHCPSCHRT FGAVDKSSKF SEHSIQCEEK TKLGLRDIHV SDSSLPLGIR  1320
LLKPLSAVIE AYIPPEALEA SWTDERRKTW GMKLNMSSSA EEVLQLLTIL ESGIKRSYLS  1380
SNFETTKELL GSSFTCADPW SVPILPWIPK TTAAVALRLL ELDASIMYVK PEKPEHFEED  1440
KEANERVLSV PVKTLNPAIK KFPGGSVKLI PSRYLPLKSK EVVLKELDQD RLVKEENYSN  1500
LAGKRKNYRR GKGNRDHGWS RKYHKKTPSI TADAGRRTAR EHEGLNLRLK QQGLRTNGRG  1560
RRTVRKRADR TSKNETFQGQ MGHMVIPDSS SGLHRNLDEE EWGVGKERMI NMEDAENSNS  1620
AEAVDSDDNV QAVEYEQGNW EVGFNGAANG WNRDVMEVSD EDEDAFGDDA GIEEAVDEYS  1680
EGNIDMSEAS DQNGIDDGVD SAASEYSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	40	47	RRLKDKKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein