PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY34555.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

SBP

Protein Properties

Length: 143aa MW: 15866.3 Da PI: 7.4374

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY34555.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	138	2.7e-43	59	135	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cqve+C ad+++ak+yhrrhkvC++h+kapvv v+gl qrfCqqCsrfhelsefD++krsCrrrLa+hnerrrk++a GAY34555.1 59 CQVENCGADMTDAKKYHRRHKVCDFHAKAPVVRVEGLAQRFCQQCSRFHELSEFDDTKRSCRRRLAGHNERRRKSSA 135 **************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence
MEASRAEGKR SLKEDDQEEE EDDEDSGGGI AGEEDKIKKK GKRGSSSAGA GGATTCVSCQ 60 VENCGADMTD AKKYHRRHKV CDFHAKAPVV RVEGLAQRFC QQCSRFHELS EFDDTKRSCR 120 RRLAGHNERR RKSSADYHGE GSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33810.1	4e-43	SBP family protein