PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY34554.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Dof

Protein Properties

Length: 361aa MW: 39443.8 Da PI: 8.3223

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY34554.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.7	5.9e-39	49	109	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++ lkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+++ GAY34554.1 49 QQPPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 109 56789*****************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MLSNCEKMVV ISSTTNEWPQ NHQIDEKNLM ASTGRVMDKA GQEPPQQQQQ PPLKCPRCDS 60 SNTKFCYYNN YSLSQPRHFC KACKRYWTRG GTLRNVPVGG GCRKNKRVKR PASANNSIDG 120 SNPSAAANPN NPHSQRQIHI SSTSNHINPL FFGLSTNPSD MNLPFSTFNS RVVSSLDTIS 180 GYDLQPQLNA LGLGFSSGLI MSNTDAGDCN YRNGFNPNKQ IQEVVTSSNS LLSSYPTFGS 240 SSSSPTIASL LASSLHQPKF MNGVVKSSTE APNHFNNNLA SFEDLQMTAN NNNNNGEAAR 300 IGMMKEVKAE EGQSRMGWNV ECQNQMEQIG LADPSLYWNS TSSVGAWHDP SNIGSSVTSL 360 I

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MLSNCEKMVV ISSTTNEWPQ NHQIDEKNLM ASTGRVMDKA GQEPPQQQQQ PPLKCPRCDS  60
SNTKFCYYNN YSLSQPRHFC KACKRYWTRG GTLRNVPVGG GCRKNKRVKR PASANNSIDG  120
SNPSAAANPN NPHSQRQIHI SSTSNHINPL FFGLSTNPSD MNLPFSTFNS RVVSSLDTIS  180
GYDLQPQLNA LGLGFSSGLI MSNTDAGDCN YRNGFNPNKQ IQEVVTSSNS LLSSYPTFGS  240
SSSSPTIASL LASSLHQPKF MNGVVKSSTE APNHFNNNLA SFEDLQMTAN NNNNNGEAAR  300
IGMMKEVKAE EGQSRMGWNV ECQNQMEQIG LADPSLYWNS TSSVGAWHDP SNIGSSVTSL  360
I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.1	4e-41	Dof family protein