PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY34548.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Protein Properties

Length: 431aa MW: 48279.5 Da PI: 6.7554

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY34548.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	40.6	4.6e-13	197	286	2	89
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE..EEETTE.EEE-.TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliyrkksgr.yvlt.kGWkeFvkangLkegDfvvFkldgrse 89 +k+l++sdv+++gr++lpk+ aee+ +++ +e++ ++++d s + W++k++ +s + + + + + +Fvk+ngL+ gD+++++ d ++ GAY34548.1 197 QKALKNSDVGSLGRIILPKREAEENlpSLSDKEGIHIVIRDvYSDKHWTLKFNQFSSSVStFS-RfRYTVDFVKQNGLEIGDSLTLYED--ES 286 799**********************666678999*8888***44333333233.247899**************933..33 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MENNFFPASN NNTATTATAN NNTINTFTNQ QLSQPSMAYT QNSQLYLPTY YHQNMQYPST 60 FPLDQSGGQS FAAAAAAPYP VYPFWLAQNG IQNGGGNNAL PAAAGSWSLQ PHIRVPKEPQ 120 RVVLDPQKTK IARIKRKLAR QKSLSLQRNA SSGASSSNVP SSAHFDATRL PTYGVDTHRD 180 LFNFCTPDNK RLRVLLQKAL KNSDVGSLGR IILPKREAEE NLPSLSDKEG IHIVIRDVYS 240 DKHWTLKFNQ FSSSVSTFSR FRYTVDFVKQ NGLEIGDSLT LYEDESKNLG QYFSVKKVER 300 PEPAAEPSYK QQNYDFFPAA NQTPTPIMHQ ARDEEEASLA LLIEQLRHKE QQETYYNLMT 360 LPLDDHEEAN NVVRASNNAT SSGIHAHLAA TSSSSHGAKM NNPEYDHHQT VDDCYSCLDM 420 LPDVDTYNFS I

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MENNFFPASN NNTATTATAN NNTINTFTNQ QLSQPSMAYT QNSQLYLPTY YHQNMQYPST  60
FPLDQSGGQS FAAAAAAPYP VYPFWLAQNG IQNGGGNNAL PAAAGSWSLQ PHIRVPKEPQ  120
RVVLDPQKTK IARIKRKLAR QKSLSLQRNA SSGASSSNVP SSAHFDATRL PTYGVDTHRD  180
LFNFCTPDNK RLRVLLQKAL KNSDVGSLGR IILPKREAEE NLPSLSDKEG IHIVIRDVYS  240
DKHWTLKFNQ FSSSVSTFSR FRYTVDFVKQ NGLEIGDSLT LYEDESKNLG QYFSVKKVER  300
PEPAAEPSYK QQNYDFFPAA NQTPTPIMHQ ARDEEEASLA LLIEQLRHKE QQETYYNLMT  360
LPLDDHEEAN NVVRASNNAT SSGIHAHLAA TSSSSHGAKM NNPEYDHHQT VDDCYSCLDM  420
LPDVDTYNFS I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28300.1	5e-40	B3 family protein