PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY34546.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Protein Properties

Length: 440aa MW: 49442.9 Da PI: 7.2294

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY34546.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	43.3	6.6e-14	197	295	2	89
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE...EEETTEEEE-.........TTHHHHHHHHT--TT-EEEEEE-SS CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy.rkksgryvlt.........kGWkeFvkangLkegDfvvFkldgr 87 +k+l++sdv+++gr++lpk+ aee+ +++ +e++ ++++d s + W++k++y +++++r+ ++ + + +Fvk+ngL+ gD+++++ d GAY34546.1 197 QKALKNSDVGSLGRIILPKREAEENlpSLSDKEGIHIVIRDvYSDKHWTLKFKYwSNNKSRIQFSssvstfsrfRYTVDFVKQNGLEIGDSLTLYED-- 293 799**********************666678999*8888***996455555555556777888889999*************933.. PP SE CS B3 88 se 89 ++ GAY34546.1 294 ES 295 33 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MENNFFPASN NNTATTATAN NNTINTFTNQ QLSQPSMAYT QNSQLYLPTY YHQNMQYPST 60 FPLDQSGGQS FAAAAAAPYP VYPFWLAQNG IQNGGGNNAL PAAAGSWSLQ PHIRVPKEPQ 120 RVVLDPQKTK IARIKRKLAR QKSLSLQRNA SSGASSSNVP SSAHFDATRL PTYGVDTHRD 180 LFNFCTPDNK RLRVLLQKAL KNSDVGSLGR IILPKREAEE NLPSLSDKEG IHIVIRDVYS 240 DKHWTLKFKY WSNNKSRIQF SSSVSTFSRF RYTVDFVKQN GLEIGDSLTL YEDESKNLGQ 300 YFSVKKVERP EPAAEPSYKQ QNYDFFPAAN QTPTPIMHQA RDEEEASLAL LIEQLRHKEQ 360 QETYYNLMTL PLDDHEEANN VVRASNNATS SGIHAHLAAT SSSSHGAKMN NPEYDHHQTV 420 DDCYSCLDML PDVDTYNFSI

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MENNFFPASN NNTATTATAN NNTINTFTNQ QLSQPSMAYT QNSQLYLPTY YHQNMQYPST  60
FPLDQSGGQS FAAAAAAPYP VYPFWLAQNG IQNGGGNNAL PAAAGSWSLQ PHIRVPKEPQ  120
RVVLDPQKTK IARIKRKLAR QKSLSLQRNA SSGASSSNVP SSAHFDATRL PTYGVDTHRD  180
LFNFCTPDNK RLRVLLQKAL KNSDVGSLGR IILPKREAEE NLPSLSDKEG IHIVIRDVYS  240
DKHWTLKFKY WSNNKSRIQF SSSVSTFSRF RYTVDFVKQN GLEIGDSLTL YEDESKNLGQ  300
YFSVKKVERP EPAAEPSYKQ QNYDFFPAAN QTPTPIMHQA RDEEEASLAL LIEQLRHKEQ  360
QETYYNLMTL PLDDHEEANN VVRASNNATS SGIHAHLAAT SSSSHGAKMN NPEYDHHQTV  420
DDCYSCLDML PDVDTYNFSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28300.1	3e-44	B3 family protein