PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY34308.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 551aa MW: 63323.6 Da PI: 5.9742 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.4 | 7.8e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd +l+ +++++G +W+ +++ g+ R++k+c++rw +yl GAY34308.1 14 KGSWAPEEDRKLIAYIRRYGIWNWSEMPKYAGLLRCGKSCRLRWMNYL 61 799*****************99**********99************97 PP | |||||||
2 | Myb_DNA-binding | 59.5 | 7.1e-19 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+eEde ++++++qlG++ W++Ia++++ +Rt++++k++w++ GAY34308.1 67 RGNFTQEEDETIIKLHQQLGNR-WSAIASRLP-RRTDNEIKNHWHT 110 89********************.*********.***********97 PP | |||||||
3 | Myb_DNA-binding | 45 | 2.5e-14 | 303 | 350 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+ +++++G +W+ +++ g+ R++k+c++rw +yl GAY34308.1 303 KGSWTPEEDWKLIAYIRRYGIWNWSEMPKYAGLLRCGKSCRLRWMNYL 350 799*****************99**********99************97 PP | |||||||
4 | Myb_DNA-binding | 61.3 | 2e-19 | 356 | 399 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+eEde ++++++qlG++ W++Ia++++ gRt++++k++w++ GAY34308.1 356 RGNFTQEEDETIIKLHEQLGNR-WSAIASRLP-GRTDNEIKNHWHS 399 89********************.*********.***********86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 551 aa Download sequence |
MVKAPGSEKP SLRKGSWAPE EDRKLIAYIR RYGIWNWSEM PKYAGLLRCG KSCRLRWMNY 60 LRPDIRRGNF TQEEDETIIK LHQQLGNRWS AIASRLPRRT DNEIKNHWHT RLSKKRLSKN 120 NQQQVLSVTE SLQDTQTAAI FEFDEANKQN QNPPEIFLAD PLPIVPNNSP KPPNVLTGCT 180 SPCPQLSTDN CSSSTSYVSA NYEEIYTIQI SEVNNYDHPS ENLDELHNFW EQPFTVDTLC 240 MTMAEGYGQE ATHTDPGFAV STPLWEYQQD YHFPTASSAS SYDADDDLWM VKAGGSEKPS 300 LRKGSWTPEE DWKLIAYIRR YGIWNWSEMP KYAGLLRCGK SCRLRWMNYL RPDIRRGNFT 360 QEEDETIIKL HEQLGNRWSA IASRLPGRTD NEIKNHWHSR LSKKRLTKNN QQQVTSVTKS 420 LQETQTAAIF EFDEANKQNQ NPPEILITDP IPIIPNNSRE PPKVLTGCTS PSPQLSADNC 480 SSSTSYVSAN YEEIYKIQSS KVSNYDHPSE NLDELHNFWE QPFTVDTLCM TMAEGYGQEA 540 TYTDPGFVFT A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 2e-53 | MYB family protein |