PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY34084.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TCP

Protein Properties

Length: 303aa MW: 33161.4 Da PI: 9.4867

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY34084.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	118.9	6.2e-37	94	254	2	135
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt......................ssssa.sec...e 74 g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWL+++a +i el+++ + + ++ + GAY34084.1 94 SGGKDRHSKVWTSKGLRDRRVRLSVTTAIQFYDLQDRLGVDQPSKAVEWLIKAAADSIAELPSLnstfpdtpkqlsdekrasegtdQ---QgFDSvelD 189 689***********************************************************87776555555444433332110...121112322 PP TCP 75 aesssssasnsssgkaaksaakskksqksaasalnlak....esrakarararertrekmriknk 135 + +++ ++n+s++++ +++a+s++s++s+ s l+l++ r kar+rarer ++++ +k++ GAY34084.1 190 GDPNNNYQQNQSQHRSLSKSACSSNSETSKGSGLSLSRselrVNRDKARERARERAAKEKDQKEN 254 222233333444447778888888889998888999887344455*******76666555544 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MEVEEIQSQT QACKLSRIGN GRLDSTKMSQ KDQYPDDEED GEQQQLQLIK RASANDSGGA 60 LGVNNTAAAA GCGGGNRLRG WHHSSRIIRV SRASGGKDRH SKVWTSKGLR DRRVRLSVTT 120 AIQFYDLQDR LGVDQPSKAV EWLIKAAADS IAELPSLNST FPDTPKQLSD EKRASEGTDQ 180 QGFDSVELDG DPNNNYQQNQ SQHRSLSKSA CSSNSETSKG SGLSLSRSEL RVNRDKARER 240 ARERAAKEKD QKENDSNGLF QLRTTRAIFV SATTSSSSFG ANPIGKLKFS PTSNANPTIQ 300 CNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	1e-47	TCP family protein