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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY34083.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | TCP | ||||||||
Protein Properties | Length: 499aa MW: 54647.5 Da PI: 7.7223 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 114.8 | 1.1e-35 | 94 | 254 | 2 | 135 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt......................ssssa.sec...e 74 g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWL+++a +i el+++ + + ++ + GAY34083.1 94 SGGKDRHSKVWTSKGLRDRRVRLSVTTAIQFYDLQDRLGVDQPSKAVEWLIKAAADSIAELPSLnstfpdtpkqlsdekrasegtdQ---QgFDSvelD 189 689*************************************************************87776555555444433332110...121112322 PP TCP 75 aesssssasnsssgkaaksaakskksqksaasalnlak....esrakarararertrekmriknk 135 + +++ ++n+s++++ +++a+s++s++s+ s l+l++ r kar+rarer ++++ +k++ GAY34083.1 190 GDPNNNYQQNQSQHRSLSKSACSSNSETSKGSGLSLSRselrVNRDKARERARERAAKEKDQKEN 254 222233333444447778888888889998888999887344455*********66665555543 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 499 aa Download sequence |
MEVEEIQSQT QACKLSRIGN GRLDSTKMSQ KDQYPDDEED GEQQQLQLIK RASANDSGGA 60 LGVNNTAAAA GCGGGNRLRG WHHSSRIIRV SRASGGKDRH SKVWTSKGLR DRRVRLSVTT 120 AIQFYDLQDR LGVDQPSKAV EWLIKAAADS IAELPSLNST FPDTPKQLSD EKRASEGTDQ 180 QGFDSVELDG DPNNNYQQNQ SQHRSLSKSA CSSNSETSKG SGLSLSRSEL RVNRDKARER 240 ARERAAKEKD QKENESQINA NRHHHHNVNP ISQSSSFTEL LTGGIGGSVN NNNNTSPTTA 300 SSQQQNEEPN FFHKATTAAV RPWPAAPMDY FNSGLLGPSS SRPPHHHHLS GQIQLGSSNS 360 LPQAMQIPPF SVTNENHHQE MQHFSFVHDH LIPVTATQPG PGGGDYFTIS SSLGFNRGTL 420 QSNSSPSVFP HIQRFGSSSP IDGSNVNVPF LIGTAPAVEN HNHHHHHHQF PPGFDGRLHL 480 YYGDGSRHSD SNQKDKGKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18390.1 | 3e-45 | TCP family protein |