PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY33348.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 231aa MW: 26662.2 Da PI: 8.7471 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.5 | 5.7e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ ++++G g+W++ ++ g+ R++k+c++rw +yl GAY33348.1 14 KGPWTPEEDQILISFIQRFGHGNWRALPKQAGLMRCGKSCRLRWINYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.7 | 1.1e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++++E+e ++++++ lG++ W+tIa++++ gRt++++k++w+++l GAY33348.1 67 RGNFSKDEEETILKLHRVLGNR-WSTIAARLP-GRTDNEIKNYWHSHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MVRTPCCEKM GSKKGPWTPE EDQILISFIQ RFGHGNWRAL PKQAGLMRCG KSCRLRWINY 60 LRPDIKRGNF SKDEEETILK LHRVLGNRWS TIAARLPGRT DNEIKNYWHS HLKKRLKQNL 120 ISPKQQCDIV QALIHSDHNS NATIHKPVCN STHQGIQNHP QDTPNFPPKS CNESTDIASE 180 NLPGIEGKYE TRDFAAMEKM NYENCSNVME FWYNILMNSG NSIEMQENSG H |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 112 | 118 | LKKRLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 5e-71 | MYB family protein |