PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | GAY33279.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 255aa MW: 27702.8 Da PI: 4.4015 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.5 | 5.6e-06 | 228 | 251 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ C++sF++ L++H + H GAY33279.1 228 FPCKSCNRSFTTEGGLQSHTKAkH 251 89*****************99877 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 255 aa Download sequence |
MFLASLTALC FVPTTDDDDN SDSDEDKMDI RLVSNGKPEL QAKPLSEKPI AVEPSASTAK 60 QNKKDVKPKL KADGSDSDDS DLNTSSSDDD ETSDDENPNL VNRDGSSDES SGELDESDDD 120 EDDEGTDESE SDDEDEETPK KFYYVTPQTA STNCCWFLKA ESSKKRPVES ASKTYVPDKK 180 AKFVTPQKTE EKKGVSHIAT PHPSKKSAKT PANNDQTKQQ PHKSGGSFPC KSCNRSFTTE 240 GGLQSHTKAK HGAPA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G03740.1 | 3e-22 | C2H2 family protein |