PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY32966.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

E2F/DP

Protein Properties

Length: 488aa MW: 54505.1 Da PI: 5.0383

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY32966.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	84.1	1.1e-26	154	218	1	70
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwk 70 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+irwk GAY32966.1 154 RYDSSLGLLTKKFINLIKHAEDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIRWK 218 6899****************************...99..**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MSGASRAPYR TAPPPPNPPR SGPIVPPIKR HLAFVTTKPP FVPSDDYHRF SNTRRAADQE 60 PEAIVVRSPQ LKRKNGMEDN EVETSEWVGS PGLTNISNGP FHTPVSAKGG RVNNRSKGIK 120 GNRSTPQTPV SNASEKISYH LGSPSALTPA GSCRYDSSLG LLTKKFINLI KHAEDGILDL 180 NKAAETLEVQ KRRIYDITNV LEGIGLIEKK LKNRIRWKTY EGLIKMIRGL DNSIPGEVDA 240 DASILQADID NLSMEELRVD EQTRELRERL RELIENENNR KWLFVTEEDI KNLHCFQNQT 300 LIAIKAPQGT TLEVPDPDEA VDYPQRRYRI ILRSTMGPID VYLVSRFEEK FEETNSVEPP 360 ASVPPVSSSD SNENQVKEII NVDRAGNETE AQAQQAHQIY SDLNSSQEVV GGMMKIVPSD 420 VDNDADYWLL SDADVSITDM WKTDCAEWDG VNMLHAEFGM SDACTPTPQT PPSRITEVPS 480 TDFNPIHR

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MSGASRAPYR TAPPPPNPPR SGPIVPPIKR HLAFVTTKPP FVPSDDYHRF SNTRRAADQE  60
PEAIVVRSPQ LKRKNGMEDN EVETSEWVGS PGLTNISNGP FHTPVSAKGG RVNNRSKGIK  120
GNRSTPQTPV SNASEKISYH LGSPSALTPA GSCRYDSSLG LLTKKFINLI KHAEDGILDL  180
NKAAETLEVQ KRRIYDITNV LEGIGLIEKK LKNRIRWKTY EGLIKMIRGL DNSIPGEVDA  240
DASILQADID NLSMEELRVD EQTRELRERL RELIENENNR KWLFVTEEDI KNLHCFQNQT  300
LIAIKAPQGT TLEVPDPDEA VDYPQRRYRI ILRSTMGPID VYLVSRFEEK FEETNSVEPP  360
ASVPPVSSSD SNENQVKEII NVDRAGNETE AQAQQAHQIY SDLNSSQEVV GGMMKIVPSD  420
VDNDADYWLL SDADVSITDM WKTDCAEWDG VNMLHAEFGM SDACTPTPQT PPSRITEVPS  480
TDFNPIHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-152	E2F/DP family protein