PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY32963.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

E2F/DP

Protein Properties

Length: 480aa MW: 53577.1 Da PI: 4.9644

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY32963.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	84.2	1e-26	146	210	1	70
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwk 70 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+irwk GAY32963.1 146 RYDSSLGLLTKKFINLIKHAEDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIRWK 210 6899****************************...99..**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MSGASRAPYR TAPPPPNPPR SGPIVPPIKR HLAFVTTKPP FVPSDDYHRF SNTRRAADQE 60 PEAIVVRSPQ LKRKNGMEDN EVETSEWVGS PGLTNISNGP FHTPVSAKGG RVNNRSKGIK 120 GNRSTPQTPV SNASSPSALT PAGSCRYDSS LGLLTKKFIN LIKHAEDGIL DLNKAAETLE 180 VQKRRIYDIT NVLEGIGLIE KKLKNRIRWK TYEGLIKMIR GLDNSIPGEV DADASILQAD 240 IDNLSMEELR VDEQTRELRE RLRELIENEN NRKWLFVTEE DIKNLHCFQN QTLIAIKAPQ 300 GTTLEVPDPD EAVDYPQRRY RIILRSTMGP IDVYLVSRFE EKFEETNSVE PPASVPPVSS 360 SDSNENQVKE IINVDRAGNE TEAQAQQAHQ IYSDLNSSQE VVGGMMKIVP SDVDNDADYW 420 LLSDADVSIT DMWKTDCAEW DGVNMLHAEF GMSDACTPTP QTPPSRITEV PSTDFNPIHR

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MSGASRAPYR TAPPPPNPPR SGPIVPPIKR HLAFVTTKPP FVPSDDYHRF SNTRRAADQE  60
PEAIVVRSPQ LKRKNGMEDN EVETSEWVGS PGLTNISNGP FHTPVSAKGG RVNNRSKGIK  120
GNRSTPQTPV SNASSPSALT PAGSCRYDSS LGLLTKKFIN LIKHAEDGIL DLNKAAETLE  180
VQKRRIYDIT NVLEGIGLIE KKLKNRIRWK TYEGLIKMIR GLDNSIPGEV DADASILQAD  240
IDNLSMEELR VDEQTRELRE RLRELIENEN NRKWLFVTEE DIKNLHCFQN QTLIAIKAPQ  300
GTTLEVPDPD EAVDYPQRRY RIILRSTMGP IDVYLVSRFE EKFEETNSVE PPASVPPVSS  360
SDSNENQVKE IINVDRAGNE TEAQAQQAHQ IYSDLNSSQE VVGGMMKIVP SDVDNDADYW  420
LLSDADVSIT DMWKTDCAEW DGVNMLHAEF GMSDACTPTP QTPPSRITEV PSTDFNPIHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-154	E2F/DP family protein