PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY32910.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 693aa MW: 76066.8 Da PI: 7.2889

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY32910.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31.1	3.9e-10	381	418	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++++ LAk++gLt +qV++WF N R + GAY32910.1 381 FEHflHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVR 418 554459******************************88 PP
2	BELL	122.6	1.6e-39	245	316	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+++l+eV++rY+qy++q+q+vissFe++ag++sak Yt+lAlk+iS++FrcLkdai++qi GAY32910.1 245 ERQEIQMKKAKLINMLDEVEQRYRQYHHQMQIVISSFEQAAGIESAKTYTALALKTISKQFRCLKDAITGQI 316 79*********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
MATYFHGNPA EFQAPDGLQT LVLMNPTTYV QQQQQQHQQF SDTNPPPAPA PAHNSLIFLN 60 SSAISPHAPP PPSHTQHFVG IPTTAHQDDS ISPLHGLLPR VHYNLYNPNY PSPPARDTPR 120 AKQGLSLSLS SHQHPAFGSQ GGQTVSGEDI RVSGGSASSG SGVTNGVSGM QSVLLSSKYL 180 KAAQELLDEV VNVNNSGISN KSEFSKKGSG NNNSNINKVI GESSAAAGDD GQSAGKRAAE 240 LTTAERQEIQ MKKAKLINML DEVEQRYRQY HHQMQIVISS FEQAAGIESA KTYTALALKT 300 ISKQFRCLKD AITGQIKAAN KMLGEEDCVG SKIEGSRLKF VDHHLRQQRA LQQLGMIQHN 360 AWRPQRGLPE RSVSVLRAWL FEHFLHPYPK DSDKQMLAKQ TGLTRSQVSN WFINARVRLW 420 KPMVEEMYLE EIKDQEQNGS EDKTSKSEHN EDSASKSTAA QEKNLVKETQ NSKSFKSSED 480 NLTNQNVHSM ISMSTIATSP IVGGNARNQS GFSLIGSSEL EGLTQGSPKK PRNSDMNMML 540 SPSNVPSISI DVKPGGNEAT NDLMPMKFDD DDRQSRDGYS FIGNQMNFIQ GFGQYPIGEI 600 GRFDAEQFTP RFSGNGVSLT LGLPHCENLS LSATHQSFLP SQNIQLGRRV EIGEPNEFGT 660 INTQSPHASA AYENMNIQNR KRFAAQLLPD FVA

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

MATYFHGNPA EFQAPDGLQT LVLMNPTTYV QQQQQQHQQF SDTNPPPAPA PAHNSLIFLN  60
SSAISPHAPP PPSHTQHFVG IPTTAHQDDS ISPLHGLLPR VHYNLYNPNY PSPPARDTPR  120
AKQGLSLSLS SHQHPAFGSQ GGQTVSGEDI RVSGGSASSG SGVTNGVSGM QSVLLSSKYL  180
KAAQELLDEV VNVNNSGISN KSEFSKKGSG NNNSNINKVI GESSAAAGDD GQSAGKRAAE  240
LTTAERQEIQ MKKAKLINML DEVEQRYRQY HHQMQIVISS FEQAAGIESA KTYTALALKT  300
ISKQFRCLKD AITGQIKAAN KMLGEEDCVG SKIEGSRLKF VDHHLRQQRA LQQLGMIQHN  360
AWRPQRGLPE RSVSVLRAWL FEHFLHPYPK DSDKQMLAKQ TGLTRSQVSN WFINARVRLW  420
KPMVEEMYLE EIKDQEQNGS EDKTSKSEHN EDSASKSTAA QEKNLVKETQ NSKSFKSSED  480
NLTNQNVHSM ISMSTIATSP IVGGNARNQS GFSLIGSSEL EGLTQGSPKK PRNSDMNMML  540
SPSNVPSISI DVKPGGNEAT NDLMPMKFDD DDRQSRDGYS FIGNQMNFIQ GFGQYPIGEI  600
GRFDAEQFTP RFSGNGVSLT LGLPHCENLS LSATHQSFLP SQNIQLGRRV EIGEPNEFGT  660
INTQSPHASA AYENMNIQNR KRFAAQLLPD FVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-170	TALE family protein