PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY32904.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Dof

Protein Properties

Length: 291aa MW: 32575.1 Da PI: 5.3377

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY32904.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	117.7	4.6e-37	15	70	6	61
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprC s+ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rkn++ GAY32904.1 15 PNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRG 70 58***************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MERVWNHKPN VEISPNCPRC GSSNTKFCYY NNYSLTQPRY FCKGCRRYWT KGGSLRNVPV 60 GGGCRKNRRG KSVRLSTDGV SSKALSYMGE INKVNGFLES TSTSSLMQQQ DGSHIDIALV 120 FANFLNQPPE EKPAGSFELP EFPDIDPSME FNSCMVSTNL ESRVQLPEEN VNNGLVRSLS 180 FSDLSSAETQ THFRDNDQSY YSMFDSVQKH GHHVQDGIQS NQVLPPLPSE EILWLNSQMM 240 MNQSLQAAAA AATQEPMLGP ADDHQAQDPN NLLFGNWSPF DFSSDDTFSK T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	5e-44	Dof family protein