PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY32514.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 401aa MW: 44113.1 Da PI: 7.7388

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY32514.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.1	1.9e-15	97	168	1	75
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgk 75 +fY+eYA++vGF +++++s++sk++g++++ + Cs+ g+++e++++ ++ +++ +tgC+a +++k++ d+k GAY32514.1 97 SFYREYARSVGFGITIKASRRSKKSGKFIDVKIACSRFGSKRESSTT---TNARSSFPKTGCNAGMHMKRRPDEK 168 5***************************************99888...77778889*********998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MEIDLELPSN EQKKLDTISD TTGDIMDGED RVDVDNGDGN SPRIGEYVEE CGPSASERVA 60 GSGNQVDLSV VGANVHKGVM CEPQNGLEFE SKEAAYSFYR EYARSVGFGI TIKASRRSKK 120 SGKFIDVKIA CSRFGSKRES STTTNARSSF PKTGCNAGMH MKRRPDEKLG EEGSLSQEAY 180 DIALQALGEA LKHCVDMNNS VRGVLEANTS SARGFLGNEK ENRGNSMAKA SKRKKMHKKK 240 KVRPEPERIS IGLQDSCQQM DQMNSRAHTV NNCYLPRRDM QQMDSGSRAP TLDGHYHSQN 300 NMQVVGQVNS ISPICDASYY GNQQCMQGQG QLHSISARVS HYGTQQSMHG LLQGQLGFRA 360 SAMHGCFDIQ DSLQDMDENS AASTQFHGIS SKRLQDKNIS R

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MEIDLELPSN EQKKLDTISD TTGDIMDGED RVDVDNGDGN SPRIGEYVEE CGPSASERVA  60
GSGNQVDLSV VGANVHKGVM CEPQNGLEFE SKEAAYSFYR EYARSVGFGI TIKASRRSKK  120
SGKFIDVKIA CSRFGSKRES STTTNARSSF PKTGCNAGMH MKRRPDEKLG EEGSLSQEAY  180
DIALQALGEA LKHCVDMNNS VRGVLEANTS SARGFLGNEK ENRGNSMAKA SKRKKMHKKK  240
KVRPEPERIS IGLQDSCQQM DQMNSRAHTV NNCYLPRRDM QQMDSGSRAP TLDGHYHSQN  300
NMQVVGQVNS ISPICDASYY GNQQCMQGQG QLHSISARVS HYGTQQSMHG LLQGQLGFRA  360
SAMHGCFDIQ DSLQDMDENS AASTQFHGIS SKRLQDKNIS R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	3e-39	FAR1 family protein